Parallel implementation of genomic sequences classification using modified Gabor wavelet transform on multicore systems
Link to publisher's homepage at http://ieeexplore.ieee.org/
Saved in:
| Main Authors: | , |
|---|---|
| Other Authors: | |
| Format: | Working Paper |
| Language: | English |
| Published: |
Institute of Electrical and Electronics Engineers (IEEE)
2012
|
| Subjects: | |
| Online Access: | http://dspace.unimap.edu.my/xmlui/handle/123456789/21294 |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
| Institution: | Universiti Malaysia Perlis |
| Language: | English |
| id |
my.unimap-21294 |
|---|---|
| record_format |
dspace |
| spelling |
my.unimap-212942012-10-10T09:11:29Z Parallel implementation of genomic sequences classification using modified Gabor wavelet transform on multicore systems Gunawan, Teddy Surya Ambikairajah, Eliathamby tsgunawan@iium.edu.my e.ambikairajah@unsw.edu.au Genomic signal processing Gene prediction Single Program Multiple Data (SPMD) Multicore system Amdahl's law Link to publisher's homepage at http://ieeexplore.ieee.org/ High processing time is required to classify genomic sequences and to identify protein coding of a DNA sequence. While computer performance has been driven largely by decreasing the size of chips while increasing the number of transistors they contain, the current computing trend is multicore system in which two or more independent cores are integrated into a single package. This paper presents the parallel implementation of the gene and exon identification of DNA sequences using the previously developed modified Gabor wavelet transform on multicore systems. Single Program Multiple Data (SPMD) parallel paradigm will be used in the parallel implementation. Furthermore, the efficiency of the proposed algorithm will be analyzed using Amdahl’s law. 2012-10-10T09:11:29Z 2012-10-10T09:11:29Z 2012-02-27 Working Paper p. 165-168 978-145771989-9 http://ieeexplore.ieee.org/xpl/articleDetails.jsp?arnumber=6178998 http://hdl.handle.net/123456789/21294 en Proceedings of the International Conference on Biomedical Engineering (ICoBE 2012) Institute of Electrical and Electronics Engineers (IEEE) |
| institution |
Universiti Malaysia Perlis |
| building |
UniMAP Library |
| collection |
Institutional Repository |
| continent |
Asia |
| country |
Malaysia |
| content_provider |
Universiti Malaysia Perlis |
| content_source |
UniMAP Library Digital Repository |
| url_provider |
http://dspace.unimap.edu.my/ |
| language |
English |
| topic |
Genomic signal processing Gene prediction Single Program Multiple Data (SPMD) Multicore system Amdahl's law |
| spellingShingle |
Genomic signal processing Gene prediction Single Program Multiple Data (SPMD) Multicore system Amdahl's law Gunawan, Teddy Surya Ambikairajah, Eliathamby Parallel implementation of genomic sequences classification using modified Gabor wavelet transform on multicore systems |
| description |
Link to publisher's homepage at http://ieeexplore.ieee.org/ |
| author2 |
tsgunawan@iium.edu.my |
| author_facet |
tsgunawan@iium.edu.my Gunawan, Teddy Surya Ambikairajah, Eliathamby |
| format |
Working Paper |
| author |
Gunawan, Teddy Surya Ambikairajah, Eliathamby |
| author_sort |
Gunawan, Teddy Surya |
| title |
Parallel implementation of genomic sequences classification using modified Gabor wavelet transform on multicore systems |
| title_short |
Parallel implementation of genomic sequences classification using modified Gabor wavelet transform on multicore systems |
| title_full |
Parallel implementation of genomic sequences classification using modified Gabor wavelet transform on multicore systems |
| title_fullStr |
Parallel implementation of genomic sequences classification using modified Gabor wavelet transform on multicore systems |
| title_full_unstemmed |
Parallel implementation of genomic sequences classification using modified Gabor wavelet transform on multicore systems |
| title_sort |
parallel implementation of genomic sequences classification using modified gabor wavelet transform on multicore systems |
| publisher |
Institute of Electrical and Electronics Engineers (IEEE) |
| publishDate |
2012 |
| url |
http://dspace.unimap.edu.my/xmlui/handle/123456789/21294 |
| _version_ |
1643793337919995904 |