Potential mechanism of xenobiotic seeding of TGFBIp fibrils and modified brain chaperones as therapy for TGFBI-associated corneal dystrophies

Transforming growth factor beta induced protein (TGFBIp) in the cornea undergoes proteolytic processing to produce peptides of uncertain physiological function with hereditary isoforms of the peptides giving rise to amyloidogenic corneal dystrophies (CD). This study explored the coacervation propens...

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Main Author: M K Abdul Rahim
Other Authors: Konstantin Pervushin
Format: Final Year Project
Language:English
Published: Nanyang Technological University 2022
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Online Access:https://hdl.handle.net/10356/162946
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spelling sg-ntu-dr.10356-1629462023-02-28T18:09:55Z Potential mechanism of xenobiotic seeding of TGFBIp fibrils and modified brain chaperones as therapy for TGFBI-associated corneal dystrophies M K Abdul Rahim Konstantin Pervushin School of Biological Sciences KPervushin@ntu.edu.sg Science::Biological sciences Transforming growth factor beta induced protein (TGFBIp) in the cornea undergoes proteolytic processing to produce peptides of uncertain physiological function with hereditary isoforms of the peptides giving rise to amyloidogenic corneal dystrophies (CD). This study explored the coacervation propensity of wildtype TGFBIp peptides to inform on physiological function and ventured to optimize brain chaperone Lipocalin-type prostaglandin D synthase (L-PGDS) for non-invasive TGFBIp- associated CD treatments. Coacervation of TGFBIp peptides were accessed through turbidites and bright-field imaging across pH, salt, molecular crowding and in the presence of pollutant 9,10- Phenanthrenequinone (9,10-PQ). TGFBIp peptide E611PVAEPDIMATNGVVHVITNVLQ633 was observed to form droplets in the presence of 9,10-PQ with prolonged exposure enhancing pathogenic fibrillation of the peptide. L-PGDS was mutated at C65 and K58 to supress off-target functions and improve disaggregation efficiency respectively. The novel RA-L-PGDS, harbouring both mutations, demonstrated improved function with predicted removal of prostaglandin D2 (PGD) synthase function and minimised membrane interactions. 9,10-PQ induced peptide coacervation is proposed to seed pathogenic fibrillation of wildtype TGFBIp peptides, indicating the capability of sporadic disease, potentially widening the prevalence of TGFBIp-associated CD. RA-L-PGDS with increased potency and potential safety can serve as an ideal candidate for non-surgical treatments for hereditary and likely environmentally induced TGFBIp-associated CD. Bachelor of Science in Biological Sciences 2022-11-14T07:00:31Z 2022-11-14T07:00:31Z 2022 Final Year Project (FYP) M K Abdul Rahim (2022). Potential mechanism of xenobiotic seeding of TGFBIp fibrils and modified brain chaperones as therapy for TGFBI-associated corneal dystrophies. Final Year Project (FYP), Nanyang Technological University, Singapore. https://hdl.handle.net/10356/162946 https://hdl.handle.net/10356/162946 en application/pdf Nanyang Technological University
institution Nanyang Technological University
building NTU Library
continent Asia
country Singapore
Singapore
content_provider NTU Library
collection DR-NTU
language English
topic Science::Biological sciences
spellingShingle Science::Biological sciences
M K Abdul Rahim
Potential mechanism of xenobiotic seeding of TGFBIp fibrils and modified brain chaperones as therapy for TGFBI-associated corneal dystrophies
description Transforming growth factor beta induced protein (TGFBIp) in the cornea undergoes proteolytic processing to produce peptides of uncertain physiological function with hereditary isoforms of the peptides giving rise to amyloidogenic corneal dystrophies (CD). This study explored the coacervation propensity of wildtype TGFBIp peptides to inform on physiological function and ventured to optimize brain chaperone Lipocalin-type prostaglandin D synthase (L-PGDS) for non-invasive TGFBIp- associated CD treatments. Coacervation of TGFBIp peptides were accessed through turbidites and bright-field imaging across pH, salt, molecular crowding and in the presence of pollutant 9,10- Phenanthrenequinone (9,10-PQ). TGFBIp peptide E611PVAEPDIMATNGVVHVITNVLQ633 was observed to form droplets in the presence of 9,10-PQ with prolonged exposure enhancing pathogenic fibrillation of the peptide. L-PGDS was mutated at C65 and K58 to supress off-target functions and improve disaggregation efficiency respectively. The novel RA-L-PGDS, harbouring both mutations, demonstrated improved function with predicted removal of prostaglandin D2 (PGD) synthase function and minimised membrane interactions. 9,10-PQ induced peptide coacervation is proposed to seed pathogenic fibrillation of wildtype TGFBIp peptides, indicating the capability of sporadic disease, potentially widening the prevalence of TGFBIp-associated CD. RA-L-PGDS with increased potency and potential safety can serve as an ideal candidate for non-surgical treatments for hereditary and likely environmentally induced TGFBIp-associated CD.
author2 Konstantin Pervushin
author_facet Konstantin Pervushin
M K Abdul Rahim
format Final Year Project
author M K Abdul Rahim
author_sort M K Abdul Rahim
title Potential mechanism of xenobiotic seeding of TGFBIp fibrils and modified brain chaperones as therapy for TGFBI-associated corneal dystrophies
title_short Potential mechanism of xenobiotic seeding of TGFBIp fibrils and modified brain chaperones as therapy for TGFBI-associated corneal dystrophies
title_full Potential mechanism of xenobiotic seeding of TGFBIp fibrils and modified brain chaperones as therapy for TGFBI-associated corneal dystrophies
title_fullStr Potential mechanism of xenobiotic seeding of TGFBIp fibrils and modified brain chaperones as therapy for TGFBI-associated corneal dystrophies
title_full_unstemmed Potential mechanism of xenobiotic seeding of TGFBIp fibrils and modified brain chaperones as therapy for TGFBI-associated corneal dystrophies
title_sort potential mechanism of xenobiotic seeding of tgfbip fibrils and modified brain chaperones as therapy for tgfbi-associated corneal dystrophies
publisher Nanyang Technological University
publishDate 2022
url https://hdl.handle.net/10356/162946
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