Genetic analysis

by Smith, G.J.D., Bahl, J., Vijaykrishna, D.
Published 2016

The influenza virus hemagglutinin head evolves faster than the stalk domain

by Kirkpatrick, E, Qiu, X, Wilson, P.C, Bahl, J, Krammer, F
Published 2020

Genetic structure of Culex erraticus populations across the Americas

by Mendenhall, I.H., Bahl, J., Blum, M.J., Wesson, D.M.
Published 2016

Viral deep sequencing needs an adaptive approach: IRMA, the iterative refinement meta-assembler

by Shepard, S.S, Meno, S, Bahl, J, Wilson, M.M, Barnes, J, Neuhaus, E
Published 2020

Erratum to: Viral deep sequencing needs an adaptive approach: IRMA, the iterative refinement meta-assembler [BMC Genomics., 17 (2016) (708)], DOI:10.1186/s12864-016-3030-6

by Shepard, S.S, Meno, S, Bahl, J, Wilson, M.M, Barnes, J, Neuhaus, E
Published 2020

Global phylodynamic analysis of avian paramyxovirus-1 provides evidence of inter-host transmission and intercontinental spatial diffusion

by Hicks, J.T., Dimitrov, K.M., Afonso, C.L., Ramey, A.M., Bahl, J.
Published 2021

Genetic diversity and evolutionary insights of respiratory syncytial virus A ON1 genotype: Global and local transmission dynamics

by Duvvuri, V.R, Granados, A, Rosenfeld, P, Bahl, J, Eshaghi, A, Gubbay, J.B
Published 2020

LABEL: Fast and accurate lineage assignment with assessment of H5N1 and H9N2 influenza A hemagglutinins

by Shepard, S.S., Davis, C.T., Bahl, J., Rivailler, P., York, I.A., Donis, R.O.
Published 2016

Lineage-specific epitope profiles for HPAI H5 pre-pandemic vaccine selection and evaluation

by Qiu, X, Duvvuri, V.R, Gubbay, J.B, Webby, R.J, Kayali, G, Bahl, J
Published 2020

Broadly-Reactive Neutralizing and Non-neutralizing Antibodies Directed against the H7 Influenza Virus Hemagglutinin Reveal Divergent Mechanisms of Protection

by Tan G.S., Leon P.E., Albrecht R.A., Margine I., Hirsh A., Bahl J., Krammer F.
Published 2019

Transmission dynamics of highly pathogenic avian influenzvirus a(H5Nx) clade 2.3.4.4, North America, 2014–2015

by Lee, D.-H, Torchetti, M.K, Hicks, J, Killian, M.L, Bahl, J, Pantin-Jackwood, M, Swayne, D.E
Published 2020

Highly pathogenic avian influenza viruses and generation of novel reassortants, United States, 2014-2015

by Lee, D.-H, Bahl, J, Torchetti, M.K, Killian, M.L, Ip, H.S, DeLiberto, T.J, Swayne, D.E
Published 2020

Evolutionary dynamics and emergence of panzootic H5N1 influenza viruses

by Vijaykrishna D., Bahl J., Riley S., Duan L., Jin X.Z., Chen H., Peiris J.S.M., Smith G.J.D., Guan Y.
Published 2018

Assessment of contemporary genetic diversity and inter-taxa/inter-region exchange of avian paramyxovirus serotype 1 in wild birds sampled in North America

by Ramey, A.M, Goraichuk, I.V, Hicks, J.T, Dimitrov, K.M, Poulson, R.L, Stallknecht, D.E, Bahl, J, Afonso, C.L
Published 2020

Non-gradient and genotype-dependent patterns of RSV gene expression

by Piedra, F.-A., Qiu, X., Teng, M.N., Avadhanula, V., Machado, A.A., Kim, D.-K., Hixson, J., Bahl, J., Piedra, P.A.
Published 2021

Avian influenza A virus (H5N1) outbreaks, Kuwait, 2007

by Al-Azemi, A, Bahl, J, Al-Zenki, S, Al-Shayji, Y, Al-Amad, S, Chen, H, Guan, Y, Peiris, J.S.M, Smith, G.J.D
Published 2020

Feasibility of reconstructed ancestral H5N1 influenza viruses for cross-clade protective vaccine development

by Ducatez, M.F., Bahl, J., Griffin, Y., Stigger-Rosser, E., Franks, J., Barman, S., Vijaykrishna, D., Webb, A., Guan, Y., Webster, R.G., Smith, G.J.D., Webby, R.J.
Published 2016

Establishment of an H6N2 influenza virus lineage in domestic ducks in southern China

by Huang, K., Bahl, J., Fan, X.H., Vijaykrishna, D., Cheung, C.L., Webby, R.J., Webster, R.G., Chen, H., Smith, G.J.D., Peiris, J.S.M., Guan, Y.
Published 2016

Phylodynamics of H1N1/2009 influenza reveals the transition from host adaptation to immune-driven selection

by Su, Y.C.F, Bahl, J, Joseph, U, Butt, K.M, Peck, H.A, Koay, E.S.C, Oon, L.L.E, Barr, I.G, Vijaykrishna, D, Smith, G.J.D
Published 2020

Ancient origins determine global biogeography of hot and cold desert cyanobacteria

by Bahl, J., Lau, M.C.Y., Smith, G.J.D., Vijaykrishna, D., Cary, S.C., Lacap, D.C., Lee, C.K., Papke, R.T., Warren-Rhodes, K.A., Wong, F.K.Y., McKay, C.P., Pointing, S.B.
Published 2016