Rule-based knowledge aggregation for large-scale protein sequence analysis of influenza A viruses

by Miotto, O., Tan, T.W., Brusic, V.
Published 2011

Supporting the curation of biological databases with reusable text mining.

by Miotto, O., Tan, T.W., Brusic, V.
Published 2014

Extraction by example: Induction of structural rules for the analysis of molecular sequence data from heterogeneous sources

by Miotto, O., Tan, T.W., Brusic, V.
Published 2014

Identification of human-to-human transmissibility factors in PB2 proteins of influenza A by large-scale mutual information analysis

by Miotto, O., Heiny, A.T., Tan, T.W., Thomas, J.T., Brusic, V.
Published 2011

Complete-proteome mapping of human influenza A adaptive mutations: Implications for human transmissibility of zoonotic strains

by Miotto, O., Heiny, A.T., Tan, T.W., Albrecht, R., Garcia-Sastre, A., August, J.T., Brusic, V.
Published 2011

Conservation and diversity of influenza A H1N1 HLA-restricted T cell epitope candidates for epitope-based vaccines

by Tan, P.T., Heiny, A.T., Miotto, O., Salmon, J., Marques Jr., E.T.A., Lemonnier, F., August, J.T.
Published 2014

Evolutionarily conserved protein sequences of influenza a viruses, avian and human, as vaccine targets

by Heiny, A.T., Miotto, O., Khan, A.M., Tan, T.W., August, J.T., Srinivasan, K.N., Zhang, G.L., Brusic, V.
Published 2011

Conservation and variability of West Nile virus proteins

by Koo, Q.Y., Khan, A.M., Ramdas, S., Miotto, O., Tan, T.W., Jung, K.-O., Salmon, J., August, J.T., Brusic, V.
Published 2011

Analysis of viral diversity for vaccine target discovery

by Khan A.M., Hu Y., Miotto O., Thevasagayam N.M., Sukumaran R., Abd Raman H.S., Brusic V., Tan T.W., Thomas August J.
Published 2020

A systematic bioinformatics approach for selection of epitope-based vaccine targets

by Khan, A.M., Brusic, V., Miotto, O., Heiny, A.T., Tan, T.W., Salmon, J., Srinivasan, K.N., Marques, Jr. E.T.A., August, J.T., Nascimento, E.J.M.
Published 2011

Conservation and variability of dengue virus proteins: Implications for vaccine design

by Khan, A.M., Miotto, O., Heiny, A.T., Tan, T.W., Nascimento, E.J.M., Marques, E.T., Srinivasan, K.N., Salmon, J., August, J.T., Zhang, G.L., Brusic, V.
Published 2011

West nile virus T-cell ligand sequences shared with other flaviviruses: A multitude of variant sequences as potential altered peptide ligands

by Jung, K.-O., Khan, A.M., Tan, B.Y.L., Hu, Y., Simon, G.G., Nascimento, E.J.M., Lemonnier, F., Brusic, V., Miotto, O., Tan, T.W., Marques, E.T.A., Dhalia, R., Salmon, J., August, J.T.
Published 2014

Safety and effectiveness of mass drug administration to accelerate elimination of artemisinin-resistant falciparum malaria: A pilot trial in four villages of Eastern Myanmar

by Landier, J, Kajeechiwa, L, Thwin, M.M, Parker, D.M, Chaumeau, V, Wiladphaingern, J, Imwong, M, Miotto, O, Patumrat, K, Duanguppama, J, Cerqueira, D, Malleret, B, R‚nia, L, Nosten, S, Von Seidlein, L, Ling, C, Proux, S, Corbel, V, Simpson, J.A, Dondorp, A.M, White, N.J, Nosten, F.H
Published 2020

Immunogrid: Towards agent-based simulations of the human immune system at a natural scale

by Halling-Brown, M., Pappalardo, F., Rapin, N., Zhang, P., Alemani, D., Emerson, A., Castiglione, F., Duroux, P., Pennisi, M., Miotto, O., Churchill, D., Rossi, E., Moss, D.S., Sansom, C.E., Bernaschi, M., Lefranc, M.-P., Brunak, S., Lund, O., Motta, S., Lollini, P.-L., Murgo, A., Palladini, A., Basford, K.E., Brusic, V., Shepherd, A.J.
Published 2014

Population transcriptomics of human malaria parasites reveals the mechanism of artemisinin resistance

by Mok, S., Ashley, E. A., Ferreira, P. E., Zhu, L., Lin, Z., Yeo, T., Chotivanich, K., Imwong, M., Pukrittayakamee, S., Dhorda, M., Nguon, C., Lim, P., Amaratunga, C., Suon, S., Hien, T. T., Htut, Y., Faiz, M. A., Onyamboko, M. A., Mayxay, M., Newton, P. N., Tripura, R., Woodrow, C. J., Miotto, O., Kwiatkowski, D. P., Nosten, F., Day, N. P. J., Preiser, P. R., White, N. J., Dondorp, A. M., Fairhurst, R. M., Bozdech, Z.
Published 2016

The impact of targeted malaria elimination with mass drug administrations on falciparum malaria in southeast Asia: A cluster randomised trial

by von Seidlein, L., Peto, T.J., Landier, J., Nguyen, T.-N., Tripura, R., Phommasone, K., Pongvongsa, T., Lwin, K.M., Keereecharoen, L., Kajeechiwa, L., Thwin, M.M., Parker, D.M., Wiladphaingern, J., Nosten, S., Proux, S., Corbel, V., Tuong-Vy, N., Phuc-Nhi, T.L., Son, D.H., Huong-Thu, P.N., Tuyen, N.T.K., Tien, N.T., Dong, L.T., Van Hue, D., Quang, H.H., Nguon, C., Davoeung, C., Rekol, H., Adhikari, B., Henriques, G., Phongmany, P., Suangkanarat, P., Jeeyapant, A., Vihokhern, B., van der Pluijm, R.W., Lubell, Y., White, L.J., Aguas, R., Promnarate, C., Sirithiranont, P., Malleret, B., Rénia, L., Onsjö, C., Chan, X.H., Chalk, J., Miotto, O., Patumrat, K., Chotivanich, K., Hanboonkunupakarn, B., Jittmala, P., Kaehler, N., Cheah, P.Y., Pell, C., Dhorda, M., Imwong, M., Snounou, G., Mukaka, M., Peerawaranun, P., Lee, S.J., Simpson, J.A., Pukrittayakamee, S., Singhasivanon, P., Grobusch, M.P., Cobelens, F., Smithuis, F., Newton, P.N., Thwaites, G.E., Day, N.P.J., Mayxay, M., Hien, T.T., Nosten, F.H., Dondorp, A.M., White, N.J.
Published 2022