Local adaptation in populations of Mycobacterium tuberculosis endemic to the Indian Ocean Rim

by Fabrizio Menardo, Sebastien Gagneux, Liliana K. Rutaihwa, Michaela Zwyer, Sonia Borrell, Iñaki Comas, Emilyn Costa Conceição, Mireia Coscolla, Helen Cox, Moses Joloba, Horng Yunn Dou, Julia Feldmann, Lukas Fenner, Janet Fyfe, Qian Gao, Darío García de Viedma, Alberto L. Garcia-Basteiro, Sebastian M. Gygli, Jerry Hella, Hellen Hiza, Levan Jugheli, Lujeko Kamwela, Midori Kato-Maeda, Qingyun Liu, Serej D. Ley, Chloe Loiseau, Surakameth Mahasirimongkol, Bijaya Malla, Prasit Palittapongarnpim, Niaina Rakotosamimanana, Voahangy Rasolofo, Miriam Reinhard, Klaus Reither, Mohamed Sasamalo, Rafael Silva Duarte, Christophe Sola, Philip Suffys, Karla Valeria Batista Lima, Dorothy Yeboah-Manu, Christian Beisel, Daniela Brites
Published 2022

GenomegaMap: Within-Species Genome-Wide d<inf>N</inf>=d<inf>S</inf> Estimation from over 10,000 Genomes

by Daniel J. Wilson, Derrick W. Crook, Timothy E.A. Peto, A. Sarah Walker, Sarah J. Hoosdally, Ana L. Gibertoni Cruz, Joshua Carter, Clara Grazian, Sarah G. Earle, Samaneh Kouchaki, Alexander Lachapelle, Yang Yang, David A. Clifton, Philip W. Fowler, Zamin Iqbal, Martin Hunt, Jeffrey Knaggs, E. Grace Smith, Priti Rathod, Lisa Jarrett, Daniela Matias, Daniela M. Cirillo, Emanuele Borroni, Simone Battaglia, Arash Ghodousi, Andrea Spitaleri, Andrea Cabibbe, Sabira Tahseen, Kayzad Nilgiriwala, Sanchi Shah, Camilla Rodrigues, Priti Kambli, Utkarsha Surve, Rukhsar Khot, Stefan Niemann, Thomas A. Kohl, Matthias Merker, Harald Hoffmann, Katharina Todt, Sara Plesnik, Nazir Ismail, Shaheed Vally Omar, Lavania Joseph, Guy Thwaites, Thuong Nguyen Thuy Thuong, Nhung Hoang Ngoc, Vijay Srinivasan, Timothy M. Walker, David Moore, Jorge Coronel, Walter Solano, George F. Gao, Guangxue He, Yanlin Zhao, Chunfa Liu, Aijing Ma, Baoli Zhu, Ian Laurenson, Pauline Claxton, Anastasia Koch, Robert Wilkinson, Ajit Lalvani, James Posey, Jennifer Gardy, Jim Werngren, Nicholas Paton, Ruwen Jou, Mei Hua Wu, Wan Hsuan Lin, Lucilaine Ferrazoli, Rosangela Siqueira de Oliveira, Irena Arandjelovic, Angkana Chaiprasert, Inaki Comas, Francis A. Drobniewski, Maha R. Farhat, Qian Gao, Rick Ong Twee Hee, Vitali Sintchenko, Philip Supply, Dick van Soolingen
Published 2022