Analyzing protein-protein interactions from affinity purification-mass spectrometry data with SAINT

by Choi, H., Liu, G., Mellacheruvu, D., Tyers, M., Gingras, A.-C., Nesvizhskii, A.I.
Published 2014

Using ProHits to store, annotate, and analyze Affinity purification-mass spectrometry (AP-MS) Data

by Liu, G., Zhang, J., Choi, H., Lambert, J.-P., Srikumar, T., Larsen, B., Nesvizhskii, A.I., Raught, B., Tyers, M., Gingras, A.-C.
Published 2014

Broadening the horizon - Level 2.5 of the HUPO-PSI format for molecular interactions

by Kerrien, S., Orchard, S., Montecchi-Palazzi, L., Aranda, B., Quinn, A.F., Vinod, N., Bader, G.D., Xenarios, I., Wojcik, J., Sherman, D., Tyers, M., Salama, J.J., Moore, S., Ceol, A., Chatr-Aryamontri, A., Oesterheld, M., Stümpflen, V., Salwinski, L., Nerothin, J., Cerami, E., Cusick, M.E., Vidal, M., Gilson, M., Armstrong, J., Woollard, P., Hogue, C., Eisenberg, D., Cesareni, G., Apweiler, R., Hermjakob, H.
Published 2014

The minimum information required for reporting a molecular interaction experiment (MIMIx)

by Orchard, S., Salwinski, L., Kerrien, S., Montecchi-Palazzi, L., Oesterheld, M., Stümpflen, V., Ceol, A., Chatr-Aryamontri, A., Armstrong, J., Woollard, P., Salama, J.J., Moore, S., Wojcik, J., Bader, G.D., Vidal, M., Cusick, M.E., Gerstein, M., Gavin, A.-C., Superti-Furga, G., Greenblatt, J., Bader, J., Uetz, P., Tyers, M., Legrain, P., Fields, S., Mulder, N., Gilson, M., Niepmann, M., Burgoon, L., Rivas, J.D.L., Prieto, C., Perreau, V.M., Hogue, C., Mewes, H.-W., Apweiler, R., Xenarios, I., Eisenberg, D., Cesareni, G., Hermjakob, H.
Published 2014