CLONING AND CHARACTERIZATION SYNTHETIC PROMOTER OF ZEBRAFISH METALLOTHIONEIN-II GENE IN RECOMBINANT Escherichia coli

Heavy metal pollutant is very dangerous, because it is toxicity, carcinogenic, and can undergo bioaccumulation and biomagnification. Metallothionein (MT) is a low molecular weight proteins (60-63 amino acids) can bind heavy metals and is involved in detoxification of heavy metals. MT is usually used...

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Main Author: Deky Junihadi, Gusti
Format: Theses
Language:Indonesia
Online Access:https://digilib.itb.ac.id/gdl/view/34369
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Institution: Institut Teknologi Bandung
Language: Indonesia
id id-itb.:34369
spelling id-itb.:343692019-02-08T08:19:37ZCLONING AND CHARACTERIZATION SYNTHETIC PROMOTER OF ZEBRAFISH METALLOTHIONEIN-II GENE IN RECOMBINANT Escherichia coli Deky Junihadi, Gusti Indonesia Theses Metallothionein-II, Pollution Metals, Biosensor, Gene Expressi INSTITUT TEKNOLOGI BANDUNG https://digilib.itb.ac.id/gdl/view/34369 Heavy metal pollutant is very dangerous, because it is toxicity, carcinogenic, and can undergo bioaccumulation and biomagnification. Metallothionein (MT) is a low molecular weight proteins (60-63 amino acids) can bind heavy metals and is involved in detoxification of heavy metals. MT is usually used as a biomarker to measure the level of heavy metal pollution in the waters. The expression of zebrafish Metallothionein-II gene (zMT-II) regulated by a promoter that can be induced by heavy metals. Activities zMT-II gene promoter can be analyzed by studying the transient expression of reporter gene regulated by a promoter in eukaryotic cells. In addition, gene promoter activity ZMT-II is thought to be studied in prokaryotes. Therefore, this study aimed to analyze the activity of MT-II gene promoter of zebrafish in Escherichia coli to control the expression of reporter gene Enhanced Green Fluorescent Protein (EGFP). Promoter Gene sequences zMT-II with accession number EU847278.1 was synthesized by the addition of restriction side for AseI (5 'end) and NheI (3' end). Synthetic promoter gene sequences zMT-II then cloned into the expression plasmid pEGFP-N1 section upstream of the reporter gene Enhanced Green Fluorescent Protein (EGFP). Promoter motif analysis was performed by using comparative study and Transfac bioinformatics program. Activities of the promoter was carried out by induction the promoter by using CdCl2.H2O then the transient expression of EGFP was measured by using Spectrofluorophotometer in Escherichia coli. Promoter synthetic of zMT-II was successfully cloned 1517 bp in length. Motif analysis showed the zMT-II promoter has elements such as TATA box, GC box, four regions of binding activator protein 1 (Ap1) and 10 Metal Response Elements (MRE) that are target binding of a transcription factor MRE-binding transcription activating factor (MTF-1 ). MTF-1 is a necessary transcription factor to activate transcription induced by heavy metal. zMT-II promoter activities in Escherichia coli with CaCl2.H2O exposure as much as 0, 25 and 50 ppm showed an increase in fluorescence intensity that allegedly because the expression of the EGFP fluorescence intensity is high at 25 ppm Cd induction. These results indicate that the zMT-II promoter can be induced by exposure to heavy metals and functional in prokaryotic cells. text
institution Institut Teknologi Bandung
building Institut Teknologi Bandung Library
continent Asia
country Indonesia
Indonesia
content_provider Institut Teknologi Bandung
collection Digital ITB
language Indonesia
description Heavy metal pollutant is very dangerous, because it is toxicity, carcinogenic, and can undergo bioaccumulation and biomagnification. Metallothionein (MT) is a low molecular weight proteins (60-63 amino acids) can bind heavy metals and is involved in detoxification of heavy metals. MT is usually used as a biomarker to measure the level of heavy metal pollution in the waters. The expression of zebrafish Metallothionein-II gene (zMT-II) regulated by a promoter that can be induced by heavy metals. Activities zMT-II gene promoter can be analyzed by studying the transient expression of reporter gene regulated by a promoter in eukaryotic cells. In addition, gene promoter activity ZMT-II is thought to be studied in prokaryotes. Therefore, this study aimed to analyze the activity of MT-II gene promoter of zebrafish in Escherichia coli to control the expression of reporter gene Enhanced Green Fluorescent Protein (EGFP). Promoter Gene sequences zMT-II with accession number EU847278.1 was synthesized by the addition of restriction side for AseI (5 'end) and NheI (3' end). Synthetic promoter gene sequences zMT-II then cloned into the expression plasmid pEGFP-N1 section upstream of the reporter gene Enhanced Green Fluorescent Protein (EGFP). Promoter motif analysis was performed by using comparative study and Transfac bioinformatics program. Activities of the promoter was carried out by induction the promoter by using CdCl2.H2O then the transient expression of EGFP was measured by using Spectrofluorophotometer in Escherichia coli. Promoter synthetic of zMT-II was successfully cloned 1517 bp in length. Motif analysis showed the zMT-II promoter has elements such as TATA box, GC box, four regions of binding activator protein 1 (Ap1) and 10 Metal Response Elements (MRE) that are target binding of a transcription factor MRE-binding transcription activating factor (MTF-1 ). MTF-1 is a necessary transcription factor to activate transcription induced by heavy metal. zMT-II promoter activities in Escherichia coli with CaCl2.H2O exposure as much as 0, 25 and 50 ppm showed an increase in fluorescence intensity that allegedly because the expression of the EGFP fluorescence intensity is high at 25 ppm Cd induction. These results indicate that the zMT-II promoter can be induced by exposure to heavy metals and functional in prokaryotic cells.
format Theses
author Deky Junihadi, Gusti
spellingShingle Deky Junihadi, Gusti
CLONING AND CHARACTERIZATION SYNTHETIC PROMOTER OF ZEBRAFISH METALLOTHIONEIN-II GENE IN RECOMBINANT Escherichia coli
author_facet Deky Junihadi, Gusti
author_sort Deky Junihadi, Gusti
title CLONING AND CHARACTERIZATION SYNTHETIC PROMOTER OF ZEBRAFISH METALLOTHIONEIN-II GENE IN RECOMBINANT Escherichia coli
title_short CLONING AND CHARACTERIZATION SYNTHETIC PROMOTER OF ZEBRAFISH METALLOTHIONEIN-II GENE IN RECOMBINANT Escherichia coli
title_full CLONING AND CHARACTERIZATION SYNTHETIC PROMOTER OF ZEBRAFISH METALLOTHIONEIN-II GENE IN RECOMBINANT Escherichia coli
title_fullStr CLONING AND CHARACTERIZATION SYNTHETIC PROMOTER OF ZEBRAFISH METALLOTHIONEIN-II GENE IN RECOMBINANT Escherichia coli
title_full_unstemmed CLONING AND CHARACTERIZATION SYNTHETIC PROMOTER OF ZEBRAFISH METALLOTHIONEIN-II GENE IN RECOMBINANT Escherichia coli
title_sort cloning and characterization synthetic promoter of zebrafish metallothionein-ii gene in recombinant escherichia coli
url https://digilib.itb.ac.id/gdl/view/34369
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