Effect of Media Osmolarity on Vi Biosynthesis and OmpR Characterization on Salmonella enterica serovar Typhi strain C6524 Cultured On Batch System

Typhoid fever disease can be prevented by using a polysaccharide-based vaccine Vi which is a virulence factor of S.typhi. To produce high yield of Vi polysaccharide from bacteria, it is important to know the biosynthesis of Vi polysaccharide and the regulators involved. In the In vivo condition, S....

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Main Author: Arisandi Wijaya, S.Si, Dwi
Format: Theses
Language:Indonesia
Online Access:https://digilib.itb.ac.id/gdl/view/35837
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Institution: Institut Teknologi Bandung
Language: Indonesia
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spelling id-itb.:358372019-03-04T10:52:02ZEffect of Media Osmolarity on Vi Biosynthesis and OmpR Characterization on Salmonella enterica serovar Typhi strain C6524 Cultured On Batch System Arisandi Wijaya, S.Si, Dwi Indonesia Theses Osmolarity, OmpR, Salmonella, Typhoid, Vi Polysaccharide INSTITUT TEKNOLOGI BANDUNG https://digilib.itb.ac.id/gdl/view/35837 Typhoid fever disease can be prevented by using a polysaccharide-based vaccine Vi which is a virulence factor of S.typhi. To produce high yield of Vi polysaccharide from bacteria, it is important to know the biosynthesis of Vi polysaccharide and the regulators involved. In the In vivo condition, S. typhi faces different osmolarity, and the bacterial two component system OmpR-EnvZ regulate by up and down capsular Vi polysaccharide biosynthesis. A high yielded Vi Polysaccharide strain, S. typhi strain C6524 used to study the effect of media osmolarity on Vi polysaccharide biosynthesis and the osmoregulation pattern of S. typhi strain C6524. The methods were performed by grown S. typhi strain C6524 grown on medium with 50 mM, 100 mM, and 150 mM osmolarity with batch system. Vi polysaccharide concentration was measured by ELISA method. For further investigation about the osmoregulation pattern of strain C6524, the osmoregulator gene, OmpR, has been isolated and sequenced using the specific primer of the OmpR gene. Nucleotide sequence analysis was done with BLAST and Lallign. Amino Acid sequence analysis was done with Prosite and Multiple Sequence Allignment. The results of cultivation showed the average concentration of polysaccharide Vi for 50 mM, 100 mM, and 150 mM osmolarities 11.49 ?g/mL, 12.06 ?g/mL, and 14.53 ?g/mL respectively. Statistical analysis using Anova stated that the osmolarity treatment of 150 mM significantly affected the level of Vi compared to the control osmolarity of 100 mM and the lower osmolarity of 50 mM. Analysis of nucleotide sequences show 100% identity between S. typhi strain C6524 and Ty2. Analysis of amino acid sequences showed that the OmpR response regulator protein of the C6524 strain also has an ?4-?5-?5 motif which was an important for the regulatory activation system when phosphorylation occured by domain kinase. This indicates that the regulator osmolarity response of S. typhi strain C6524 has no difference with the response regulator owned by S. typhi strain Ty2. A high Vi response rate in the 150 mM osmolarity treatment requires further research for RcsB-RcsC, another two component system involved in Vi Biosynthesis. text
institution Institut Teknologi Bandung
building Institut Teknologi Bandung Library
continent Asia
country Indonesia
Indonesia
content_provider Institut Teknologi Bandung
collection Digital ITB
language Indonesia
description Typhoid fever disease can be prevented by using a polysaccharide-based vaccine Vi which is a virulence factor of S.typhi. To produce high yield of Vi polysaccharide from bacteria, it is important to know the biosynthesis of Vi polysaccharide and the regulators involved. In the In vivo condition, S. typhi faces different osmolarity, and the bacterial two component system OmpR-EnvZ regulate by up and down capsular Vi polysaccharide biosynthesis. A high yielded Vi Polysaccharide strain, S. typhi strain C6524 used to study the effect of media osmolarity on Vi polysaccharide biosynthesis and the osmoregulation pattern of S. typhi strain C6524. The methods were performed by grown S. typhi strain C6524 grown on medium with 50 mM, 100 mM, and 150 mM osmolarity with batch system. Vi polysaccharide concentration was measured by ELISA method. For further investigation about the osmoregulation pattern of strain C6524, the osmoregulator gene, OmpR, has been isolated and sequenced using the specific primer of the OmpR gene. Nucleotide sequence analysis was done with BLAST and Lallign. Amino Acid sequence analysis was done with Prosite and Multiple Sequence Allignment. The results of cultivation showed the average concentration of polysaccharide Vi for 50 mM, 100 mM, and 150 mM osmolarities 11.49 ?g/mL, 12.06 ?g/mL, and 14.53 ?g/mL respectively. Statistical analysis using Anova stated that the osmolarity treatment of 150 mM significantly affected the level of Vi compared to the control osmolarity of 100 mM and the lower osmolarity of 50 mM. Analysis of nucleotide sequences show 100% identity between S. typhi strain C6524 and Ty2. Analysis of amino acid sequences showed that the OmpR response regulator protein of the C6524 strain also has an ?4-?5-?5 motif which was an important for the regulatory activation system when phosphorylation occured by domain kinase. This indicates that the regulator osmolarity response of S. typhi strain C6524 has no difference with the response regulator owned by S. typhi strain Ty2. A high Vi response rate in the 150 mM osmolarity treatment requires further research for RcsB-RcsC, another two component system involved in Vi Biosynthesis.
format Theses
author Arisandi Wijaya, S.Si, Dwi
spellingShingle Arisandi Wijaya, S.Si, Dwi
Effect of Media Osmolarity on Vi Biosynthesis and OmpR Characterization on Salmonella enterica serovar Typhi strain C6524 Cultured On Batch System
author_facet Arisandi Wijaya, S.Si, Dwi
author_sort Arisandi Wijaya, S.Si, Dwi
title Effect of Media Osmolarity on Vi Biosynthesis and OmpR Characterization on Salmonella enterica serovar Typhi strain C6524 Cultured On Batch System
title_short Effect of Media Osmolarity on Vi Biosynthesis and OmpR Characterization on Salmonella enterica serovar Typhi strain C6524 Cultured On Batch System
title_full Effect of Media Osmolarity on Vi Biosynthesis and OmpR Characterization on Salmonella enterica serovar Typhi strain C6524 Cultured On Batch System
title_fullStr Effect of Media Osmolarity on Vi Biosynthesis and OmpR Characterization on Salmonella enterica serovar Typhi strain C6524 Cultured On Batch System
title_full_unstemmed Effect of Media Osmolarity on Vi Biosynthesis and OmpR Characterization on Salmonella enterica serovar Typhi strain C6524 Cultured On Batch System
title_sort effect of media osmolarity on vi biosynthesis and ompr characterization on salmonella enterica serovar typhi strain c6524 cultured on batch system
url https://digilib.itb.ac.id/gdl/view/35837
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