HUBUNGAN KUANTITATIF STRUKTUR-AKTIVITAS (HKSA) TURUNAN DITIOKARBAMAT SEBAGAI KANDIDAT SENYAWA ANTIKANKER HATI

Liver cancer or hepatocellular carcinoma (HCC) is the second leading cause of cancer deaths worldwide. Liver cancer is commonly caused by hepatitis B (HBV) or C (HCV) virus. Treatment with surgery or organ transplantation still has many constraints. The aim of this study was to determine the best...

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Main Author: Christian Prawiro, Joshua
Format: Final Project
Language:Indonesia
Online Access:https://digilib.itb.ac.id/gdl/view/44326
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Institution: Institut Teknologi Bandung
Language: Indonesia
id id-itb.:44326
spelling id-itb.:443262019-10-10T10:35:50ZHUBUNGAN KUANTITATIF STRUKTUR-AKTIVITAS (HKSA) TURUNAN DITIOKARBAMAT SEBAGAI KANDIDAT SENYAWA ANTIKANKER HATI Christian Prawiro, Joshua Indonesia Final Project Hepatocellular carcinoma, QSAR, dithiocarbamates, KEAP1 protein receptors, docking INSTITUT TEKNOLOGI BANDUNG https://digilib.itb.ac.id/gdl/view/44326 Liver cancer or hepatocellular carcinoma (HCC) is the second leading cause of cancer deaths worldwide. Liver cancer is commonly caused by hepatitis B (HBV) or C (HCV) virus. Treatment with surgery or organ transplantation still has many constraints. The aim of this study was to determine the best QSAR equation of dithiocarbamate derivatives and candidates of new derived compounds with lower IC50 predictive value and optimal interaction with KEAP1 protein receptors. This study analyzed statistically by using Quantitative Structure-Activity Relationship (QSAR) method on training set that have anticancer activity in liver cancer cells (Bel-7402). The training set of 42 compounds was designed with GaussView 5.0.8 and geometrically optimized with Gaussian 09W. The physicochemical properties of the optimized compounds were calculated through calculation of descriptor with MOE 2014.09. The statistical analysis was performed using SPSS Statistics 22.0 to obtain the best QSAR equation: log IC50 (?M) = ?37,126 (± 8,236) + 0,425 (± 0,062) x AM1_dipole ? 4,736 (± 0,925) x AM1_HOMO ?0,02 (± 0,005) x ASA_H + 0.019 (± 0.009) x vol. The design of the new derivatives was based on the Topliss scheme and the Craig curve to obtained 15 compounds with lower IC50 prediction value than the parent compound (compound 27f or 2-[5-(1H-pyrrol-3-yl)- 1,3,4-oxadiazol-2-yl] ethyl [(pyridin-3-yl) methyl] carbamodithioate). Molecular docking with AutoDock 4.2.6 was performed to see the interaction of new derivatives with KEAP1 protein receptors. Docking results were analyzed with Discovery Studio Visualizer 3.5. Biphenyl and phenanthrene derivatives had lower IC50 prediction value than compound 27f and can interact optimally with binding site of KEAP1 protein receptors to be candidates for liver anticancer compounds. text
institution Institut Teknologi Bandung
building Institut Teknologi Bandung Library
continent Asia
country Indonesia
Indonesia
content_provider Institut Teknologi Bandung
collection Digital ITB
language Indonesia
description Liver cancer or hepatocellular carcinoma (HCC) is the second leading cause of cancer deaths worldwide. Liver cancer is commonly caused by hepatitis B (HBV) or C (HCV) virus. Treatment with surgery or organ transplantation still has many constraints. The aim of this study was to determine the best QSAR equation of dithiocarbamate derivatives and candidates of new derived compounds with lower IC50 predictive value and optimal interaction with KEAP1 protein receptors. This study analyzed statistically by using Quantitative Structure-Activity Relationship (QSAR) method on training set that have anticancer activity in liver cancer cells (Bel-7402). The training set of 42 compounds was designed with GaussView 5.0.8 and geometrically optimized with Gaussian 09W. The physicochemical properties of the optimized compounds were calculated through calculation of descriptor with MOE 2014.09. The statistical analysis was performed using SPSS Statistics 22.0 to obtain the best QSAR equation: log IC50 (?M) = ?37,126 (± 8,236) + 0,425 (± 0,062) x AM1_dipole ? 4,736 (± 0,925) x AM1_HOMO ?0,02 (± 0,005) x ASA_H + 0.019 (± 0.009) x vol. The design of the new derivatives was based on the Topliss scheme and the Craig curve to obtained 15 compounds with lower IC50 prediction value than the parent compound (compound 27f or 2-[5-(1H-pyrrol-3-yl)- 1,3,4-oxadiazol-2-yl] ethyl [(pyridin-3-yl) methyl] carbamodithioate). Molecular docking with AutoDock 4.2.6 was performed to see the interaction of new derivatives with KEAP1 protein receptors. Docking results were analyzed with Discovery Studio Visualizer 3.5. Biphenyl and phenanthrene derivatives had lower IC50 prediction value than compound 27f and can interact optimally with binding site of KEAP1 protein receptors to be candidates for liver anticancer compounds.
format Final Project
author Christian Prawiro, Joshua
spellingShingle Christian Prawiro, Joshua
HUBUNGAN KUANTITATIF STRUKTUR-AKTIVITAS (HKSA) TURUNAN DITIOKARBAMAT SEBAGAI KANDIDAT SENYAWA ANTIKANKER HATI
author_facet Christian Prawiro, Joshua
author_sort Christian Prawiro, Joshua
title HUBUNGAN KUANTITATIF STRUKTUR-AKTIVITAS (HKSA) TURUNAN DITIOKARBAMAT SEBAGAI KANDIDAT SENYAWA ANTIKANKER HATI
title_short HUBUNGAN KUANTITATIF STRUKTUR-AKTIVITAS (HKSA) TURUNAN DITIOKARBAMAT SEBAGAI KANDIDAT SENYAWA ANTIKANKER HATI
title_full HUBUNGAN KUANTITATIF STRUKTUR-AKTIVITAS (HKSA) TURUNAN DITIOKARBAMAT SEBAGAI KANDIDAT SENYAWA ANTIKANKER HATI
title_fullStr HUBUNGAN KUANTITATIF STRUKTUR-AKTIVITAS (HKSA) TURUNAN DITIOKARBAMAT SEBAGAI KANDIDAT SENYAWA ANTIKANKER HATI
title_full_unstemmed HUBUNGAN KUANTITATIF STRUKTUR-AKTIVITAS (HKSA) TURUNAN DITIOKARBAMAT SEBAGAI KANDIDAT SENYAWA ANTIKANKER HATI
title_sort hubungan kuantitatif struktur-aktivitas (hksa) turunan ditiokarbamat sebagai kandidat senyawa antikanker hati
url https://digilib.itb.ac.id/gdl/view/44326
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