OVERPRODUCTION OF RECOMBINANT DNA POLYMERASE THERMUS THERMOPHILUS IN ESCHERICHIA COLI BL21-GOLD(DE3) AS WELL AS ITS PURIFICATION AND CHARACTERIZATION
Polymerase Chain Reaction (PCR) method is widely used in molecular biotechnology for research and diagnostic purposes. DNA polymerase is an enzyme that plays an important role for in vitro DNA synthesis by PCR. One of the mostly used DNA polymerase is the Thermus thermophilus DNA polymerase (DNA...
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id-itb.:565652021-06-23T09:44:26ZOVERPRODUCTION OF RECOMBINANT DNA POLYMERASE THERMUS THERMOPHILUS IN ESCHERICHIA COLI BL21-GOLD(DE3) AS WELL AS ITS PURIFICATION AND CHARACTERIZATION Sulistiawati, Ayu Indonesia Theses DNA polymerase Thermus thermophilus, E. coli BL21-GOLD(DE3), PCR, quantitative PCR (qPCR) INSTITUT TEKNOLOGI BANDUNG https://digilib.itb.ac.id/gdl/view/56565 Polymerase Chain Reaction (PCR) method is widely used in molecular biotechnology for research and diagnostic purposes. DNA polymerase is an enzyme that plays an important role for in vitro DNA synthesis by PCR. One of the mostly used DNA polymerase is the Thermus thermophilus DNA polymerase (DNApol_Tth). The procurement of DNA polymerase in Indonesia is expensive and requires a long time as the consequences of importing DNA polymerase from other countries. The purpose of this study was to determine the optimal conditions for overproduction, purification, and characterization of recombinant DNApol_Tth in Escherichia coli BL21-GOLD(DE3). This recombinant DNApol_Tth is expected to be one of DNA polymerases that produced in Indonesia. Recombinant DNApol_Tth was overproduced by E. coli BL21-GOLD (DE3) as host cell in Luria-Bertani (LB) medium at 25°C, 20 hours, 150 rpm and induced with IPTG at final concentration 0.1 mM. This enzyme was purified using affinity chromatography of Ni-NTA resin and was eluted using 250 mM imidazole solution. The recombinant DNApol_Tth can synthesize PCR products with a size of up to 3,647 base pairs, resistant to PCR inhibitors i.e., blood up to 5% and 8% plasma, suitable to be used for detection in PCR and quantitative (qPCR) method, as well as has reverse transcriptase activity. Based on its profiles, recombinant DNApol_Tth produced in E. coli BL21-GOLD from this study is valuable to be up scaled to substitute imported DNA pol. text |
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Polymerase Chain Reaction (PCR) method is widely used in molecular
biotechnology for research and diagnostic purposes. DNA polymerase is an enzyme
that plays an important role for in vitro DNA synthesis by PCR. One of the mostly
used DNA polymerase is the Thermus thermophilus DNA polymerase
(DNApol_Tth). The procurement of DNA polymerase in Indonesia is expensive
and requires a long time as the consequences of importing DNA polymerase from
other countries. The purpose of this study was to determine the optimal conditions
for overproduction, purification, and characterization of recombinant DNApol_Tth
in Escherichia coli BL21-GOLD(DE3). This recombinant DNApol_Tth is expected
to be one of DNA polymerases that produced in Indonesia. Recombinant
DNApol_Tth was overproduced by E. coli BL21-GOLD (DE3) as host cell in
Luria-Bertani (LB) medium at 25°C, 20 hours, 150 rpm and induced with IPTG at
final concentration 0.1 mM. This enzyme was purified using affinity
chromatography of Ni-NTA resin and was eluted using 250 mM imidazole solution.
The recombinant DNApol_Tth can synthesize PCR products with a size of up to
3,647 base pairs, resistant to PCR inhibitors i.e., blood up to 5% and 8% plasma,
suitable to be used for detection in PCR and quantitative (qPCR) method, as well
as has reverse transcriptase activity. Based on its profiles, recombinant
DNApol_Tth produced in E. coli BL21-GOLD from this study is valuable to be up
scaled to substitute imported DNA pol.
|
format |
Theses |
author |
Sulistiawati, Ayu |
spellingShingle |
Sulistiawati, Ayu OVERPRODUCTION OF RECOMBINANT DNA POLYMERASE THERMUS THERMOPHILUS IN ESCHERICHIA COLI BL21-GOLD(DE3) AS WELL AS ITS PURIFICATION AND CHARACTERIZATION |
author_facet |
Sulistiawati, Ayu |
author_sort |
Sulistiawati, Ayu |
title |
OVERPRODUCTION OF RECOMBINANT DNA POLYMERASE THERMUS THERMOPHILUS IN ESCHERICHIA COLI BL21-GOLD(DE3) AS WELL AS ITS PURIFICATION AND CHARACTERIZATION |
title_short |
OVERPRODUCTION OF RECOMBINANT DNA POLYMERASE THERMUS THERMOPHILUS IN ESCHERICHIA COLI BL21-GOLD(DE3) AS WELL AS ITS PURIFICATION AND CHARACTERIZATION |
title_full |
OVERPRODUCTION OF RECOMBINANT DNA POLYMERASE THERMUS THERMOPHILUS IN ESCHERICHIA COLI BL21-GOLD(DE3) AS WELL AS ITS PURIFICATION AND CHARACTERIZATION |
title_fullStr |
OVERPRODUCTION OF RECOMBINANT DNA POLYMERASE THERMUS THERMOPHILUS IN ESCHERICHIA COLI BL21-GOLD(DE3) AS WELL AS ITS PURIFICATION AND CHARACTERIZATION |
title_full_unstemmed |
OVERPRODUCTION OF RECOMBINANT DNA POLYMERASE THERMUS THERMOPHILUS IN ESCHERICHIA COLI BL21-GOLD(DE3) AS WELL AS ITS PURIFICATION AND CHARACTERIZATION |
title_sort |
overproduction of recombinant dna polymerase thermus thermophilus in escherichia coli bl21-gold(de3) as well as its purification and characterization |
url |
https://digilib.itb.ac.id/gdl/view/56565 |
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