PRODUCTION OF RECOMBINANT CANDIDATE PROTEASE FROM BACILLUS VELEZENSIS, A SYMBIONT OF FRESHWATER SPONGE EUNAPIUS CARTERI AND TEST OF ITS ACTIVITY AND INHIBITORY ON THE GROWTH OF PATHOGENIC BACTERIA.

In previous research, a coding gene of protease candidate from fresh water sponge (Eunapius carteri) symbiont, Bacillus velezensis, has been successfully isolated using degenerated primer. Sequencing analysis result of the gene was identical to the S8 serine peptidase of B. velezensis in NCBI gen...

Full description

Saved in:
Bibliographic Details
Main Author: Dwi Cahyanti, Naomi
Format: Theses
Language:Indonesia
Online Access:https://digilib.itb.ac.id/gdl/view/70762
Tags: Add Tag
No Tags, Be the first to tag this record!
Institution: Institut Teknologi Bandung
Language: Indonesia
id id-itb.:70762
spelling id-itb.:707622023-01-20T10:39:12ZPRODUCTION OF RECOMBINANT CANDIDATE PROTEASE FROM BACILLUS VELEZENSIS, A SYMBIONT OF FRESHWATER SPONGE EUNAPIUS CARTERI AND TEST OF ITS ACTIVITY AND INHIBITORY ON THE GROWTH OF PATHOGENIC BACTERIA. Dwi Cahyanti, Naomi Indonesia Theses protease, Bacillus velezensis, E. coli BL21(DE3), inhibition bacteria. INSTITUT TEKNOLOGI BANDUNG https://digilib.itb.ac.id/gdl/view/70762 In previous research, a coding gene of protease candidate from fresh water sponge (Eunapius carteri) symbiont, Bacillus velezensis, has been successfully isolated using degenerated primer. Sequencing analysis result of the gene was identical to the S8 serine peptidase of B. velezensis in NCBI genebank. The protease candidate gene was cloned into pET16b and produced recombinantly in Escherichia coli with IPTG induction. The purpose of this research is to obtain the optimum conditions for overproduction of the recombinant candidate protease and to verify its protease activity as well as its inhibitory effect on growth of pathogenic bacteria. Overproduction of the protease in E. coli BL21(DE3), E. coli BL21-Gold(DE3), E. coli BL21-Codonplus(DE3)-RIPL at 37 ?C and 20 ?C showed that protease was produced dominantly in insoluble form. Overproduction using the GroES/EL-TF chaperone system in E. coli BL21(DE3) host at 20 ?C induced by tetracyclin 10 ng/ml and IPTG 0.01 mM showed an increase in the solubility of Full protease 13.53% ± 2.04 and Half protease 36.39% ± 8.96. Intracellular soluble crude protein from overproduction using the GroES/EL-TF chaperon system was tested for its protease activity in caseinolytic media with proteinase K as a positive control. Based on this test, it was found that the recombinant proteins have protease activity with the formation of a clear zone around the disc. Inhibition activity test on the growth of pathogenic bacteria showed that recombinant proteases have more potential to inhibit Methicilin Resistant Staphylococcus aureus (MRSA) than ESBL E. coli. The protease activity is assumed by a catalytic triad mechanism according to the active site contained in S8 serine peptidase in B. velezensis. text
institution Institut Teknologi Bandung
building Institut Teknologi Bandung Library
continent Asia
country Indonesia
Indonesia
content_provider Institut Teknologi Bandung
collection Digital ITB
language Indonesia
description In previous research, a coding gene of protease candidate from fresh water sponge (Eunapius carteri) symbiont, Bacillus velezensis, has been successfully isolated using degenerated primer. Sequencing analysis result of the gene was identical to the S8 serine peptidase of B. velezensis in NCBI genebank. The protease candidate gene was cloned into pET16b and produced recombinantly in Escherichia coli with IPTG induction. The purpose of this research is to obtain the optimum conditions for overproduction of the recombinant candidate protease and to verify its protease activity as well as its inhibitory effect on growth of pathogenic bacteria. Overproduction of the protease in E. coli BL21(DE3), E. coli BL21-Gold(DE3), E. coli BL21-Codonplus(DE3)-RIPL at 37 ?C and 20 ?C showed that protease was produced dominantly in insoluble form. Overproduction using the GroES/EL-TF chaperone system in E. coli BL21(DE3) host at 20 ?C induced by tetracyclin 10 ng/ml and IPTG 0.01 mM showed an increase in the solubility of Full protease 13.53% ± 2.04 and Half protease 36.39% ± 8.96. Intracellular soluble crude protein from overproduction using the GroES/EL-TF chaperon system was tested for its protease activity in caseinolytic media with proteinase K as a positive control. Based on this test, it was found that the recombinant proteins have protease activity with the formation of a clear zone around the disc. Inhibition activity test on the growth of pathogenic bacteria showed that recombinant proteases have more potential to inhibit Methicilin Resistant Staphylococcus aureus (MRSA) than ESBL E. coli. The protease activity is assumed by a catalytic triad mechanism according to the active site contained in S8 serine peptidase in B. velezensis.
format Theses
author Dwi Cahyanti, Naomi
spellingShingle Dwi Cahyanti, Naomi
PRODUCTION OF RECOMBINANT CANDIDATE PROTEASE FROM BACILLUS VELEZENSIS, A SYMBIONT OF FRESHWATER SPONGE EUNAPIUS CARTERI AND TEST OF ITS ACTIVITY AND INHIBITORY ON THE GROWTH OF PATHOGENIC BACTERIA.
author_facet Dwi Cahyanti, Naomi
author_sort Dwi Cahyanti, Naomi
title PRODUCTION OF RECOMBINANT CANDIDATE PROTEASE FROM BACILLUS VELEZENSIS, A SYMBIONT OF FRESHWATER SPONGE EUNAPIUS CARTERI AND TEST OF ITS ACTIVITY AND INHIBITORY ON THE GROWTH OF PATHOGENIC BACTERIA.
title_short PRODUCTION OF RECOMBINANT CANDIDATE PROTEASE FROM BACILLUS VELEZENSIS, A SYMBIONT OF FRESHWATER SPONGE EUNAPIUS CARTERI AND TEST OF ITS ACTIVITY AND INHIBITORY ON THE GROWTH OF PATHOGENIC BACTERIA.
title_full PRODUCTION OF RECOMBINANT CANDIDATE PROTEASE FROM BACILLUS VELEZENSIS, A SYMBIONT OF FRESHWATER SPONGE EUNAPIUS CARTERI AND TEST OF ITS ACTIVITY AND INHIBITORY ON THE GROWTH OF PATHOGENIC BACTERIA.
title_fullStr PRODUCTION OF RECOMBINANT CANDIDATE PROTEASE FROM BACILLUS VELEZENSIS, A SYMBIONT OF FRESHWATER SPONGE EUNAPIUS CARTERI AND TEST OF ITS ACTIVITY AND INHIBITORY ON THE GROWTH OF PATHOGENIC BACTERIA.
title_full_unstemmed PRODUCTION OF RECOMBINANT CANDIDATE PROTEASE FROM BACILLUS VELEZENSIS, A SYMBIONT OF FRESHWATER SPONGE EUNAPIUS CARTERI AND TEST OF ITS ACTIVITY AND INHIBITORY ON THE GROWTH OF PATHOGENIC BACTERIA.
title_sort production of recombinant candidate protease from bacillus velezensis, a symbiont of freshwater sponge eunapius carteri and test of its activity and inhibitory on the growth of pathogenic bacteria.
url https://digilib.itb.ac.id/gdl/view/70762
_version_ 1822991733771730944