CLONING FERREDOXIN, FLAVODOXIN AND FERREDOXIN (FLAVODOXIN) REDUCTASE GENE INTO PET16B EXPRESSION VECTOR.

In order to improve the production of artemisinin, efforts were made to produce artemisinin and other terpenoids semisynthetically by incorporating microbial genetic engineering as an alternative for sustainable production. The promiscuity of amorphadiene synthase allows the enzyme to utilize...

Full description

Saved in:
Bibliographic Details
Main Author: Jessica
Format: Final Project
Language:Indonesia
Online Access:https://digilib.itb.ac.id/gdl/view/78416
Tags: Add Tag
No Tags, Be the first to tag this record!
Institution: Institut Teknologi Bandung
Language: Indonesia
id id-itb.:78416
spelling id-itb.:784162023-09-19T16:54:43ZCLONING FERREDOXIN, FLAVODOXIN AND FERREDOXIN (FLAVODOXIN) REDUCTASE GENE INTO PET16B EXPRESSION VECTOR. Jessica Indonesia Final Project Ferredoxin, flavodoxin, ferredoxin (flavodoxin) reductase, CPEC, Quickstep INSTITUT TEKNOLOGI BANDUNG https://digilib.itb.ac.id/gdl/view/78416 In order to improve the production of artemisinin, efforts were made to produce artemisinin and other terpenoids semisynthetically by incorporating microbial genetic engineering as an alternative for sustainable production. The promiscuity of amorphadiene synthase allows the enzyme to utilize hydroxylated farnesyl (12-OH FPP) as a substrate to produce artemisinic aldehyde. This process led to a shortened artemisinin biosynthesis pathway. CYP124 protein from Mycobacterium tuberculosis is known to have the ability to catalyze ?-hydroxylation reaction on FPP. However, CYP124 requires protein carriers and electron transfer from NADPH/NADH, namely ferredoxin or flavodoxin and ferredoxin (flavodoxin) reductase. This research was conducted to clone the genes that code for these three proteins and insert them into the pET16b expression vector through QuickStep-Cloning and Circular Polymerase Extension Cloning (CPEC). The QuickStep-Cloning has not been successful because of the difficulty of obtaining single-strand DNA from asymmetric PCR. Gene cloning using the CPEC method was successfully transformed into Escherichia coli DH5? competent cells. The success of gene cloning was confirmed through colony PCR, restriction analysis, and DNA sequence analysis. The fpr gene has successfully been inserted into pET16b. The research phase was continued with protein expression experiments at 37oC with IPTG induction and without IPTG induction. text
institution Institut Teknologi Bandung
building Institut Teknologi Bandung Library
continent Asia
country Indonesia
Indonesia
content_provider Institut Teknologi Bandung
collection Digital ITB
language Indonesia
description In order to improve the production of artemisinin, efforts were made to produce artemisinin and other terpenoids semisynthetically by incorporating microbial genetic engineering as an alternative for sustainable production. The promiscuity of amorphadiene synthase allows the enzyme to utilize hydroxylated farnesyl (12-OH FPP) as a substrate to produce artemisinic aldehyde. This process led to a shortened artemisinin biosynthesis pathway. CYP124 protein from Mycobacterium tuberculosis is known to have the ability to catalyze ?-hydroxylation reaction on FPP. However, CYP124 requires protein carriers and electron transfer from NADPH/NADH, namely ferredoxin or flavodoxin and ferredoxin (flavodoxin) reductase. This research was conducted to clone the genes that code for these three proteins and insert them into the pET16b expression vector through QuickStep-Cloning and Circular Polymerase Extension Cloning (CPEC). The QuickStep-Cloning has not been successful because of the difficulty of obtaining single-strand DNA from asymmetric PCR. Gene cloning using the CPEC method was successfully transformed into Escherichia coli DH5? competent cells. The success of gene cloning was confirmed through colony PCR, restriction analysis, and DNA sequence analysis. The fpr gene has successfully been inserted into pET16b. The research phase was continued with protein expression experiments at 37oC with IPTG induction and without IPTG induction.
format Final Project
author Jessica
spellingShingle Jessica
CLONING FERREDOXIN, FLAVODOXIN AND FERREDOXIN (FLAVODOXIN) REDUCTASE GENE INTO PET16B EXPRESSION VECTOR.
author_facet Jessica
author_sort Jessica
title CLONING FERREDOXIN, FLAVODOXIN AND FERREDOXIN (FLAVODOXIN) REDUCTASE GENE INTO PET16B EXPRESSION VECTOR.
title_short CLONING FERREDOXIN, FLAVODOXIN AND FERREDOXIN (FLAVODOXIN) REDUCTASE GENE INTO PET16B EXPRESSION VECTOR.
title_full CLONING FERREDOXIN, FLAVODOXIN AND FERREDOXIN (FLAVODOXIN) REDUCTASE GENE INTO PET16B EXPRESSION VECTOR.
title_fullStr CLONING FERREDOXIN, FLAVODOXIN AND FERREDOXIN (FLAVODOXIN) REDUCTASE GENE INTO PET16B EXPRESSION VECTOR.
title_full_unstemmed CLONING FERREDOXIN, FLAVODOXIN AND FERREDOXIN (FLAVODOXIN) REDUCTASE GENE INTO PET16B EXPRESSION VECTOR.
title_sort cloning ferredoxin, flavodoxin and ferredoxin (flavodoxin) reductase gene into pet16b expression vector.
url https://digilib.itb.ac.id/gdl/view/78416
_version_ 1822995747045376000