ANALISIS HOMOLOGI, PHYLOGENETIC TREE DAN PREDIKSI EPITOP GEN PENYANDI 37 kDa ompA DARI ISOLAT Pasteurella multocida ASAL NUSA TENGGARA TIMUR PENELITIAN EKSPLORATIF LABORATORIS
Thirty seven kDa omp A gene of Pasteurella multocida isolates from NTT buffalo, NTT cattle, and Katha strains were analyzed nucleotide sequence homology and phylogenetic tree with ruminant isolates from various countries in the world: India, China, Iran, and USA from GenBank data and B cell epitope...
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id-langga.833522019-06-19T03:02:53Z http://repository.unair.ac.id/83352/ ANALISIS HOMOLOGI, PHYLOGENETIC TREE DAN PREDIKSI EPITOP GEN PENYANDI 37 kDa ompA DARI ISOLAT Pasteurella multocida ASAL NUSA TENGGARA TIMUR PENELITIAN EKSPLORATIF LABORATORIS ARINI RAHMI DEWI, 061514253020 SF600-1100 Veterinary medicine Thirty seven kDa omp A gene of Pasteurella multocida isolates from NTT buffalo, NTT cattle, and Katha strains were analyzed nucleotide sequence homology and phylogenetic tree with ruminant isolates from various countries in the world: India, China, Iran, and USA from GenBank data and B cell epitope predictions from both NTT isolates. Three Nucleotide sequences from three isolates were homology analyzed using BLAST at NCBI then phylogenetic tree using MEGA-X program and epitope prediction by online program at IEDB. The results showed 93-100% homology, phylogenetic tree of buffalo isolate and strain Katha with bovine from India, China, and Iran; buffalo from India; yak from China; calf from India; and cattle from India. Prediction tools found 5 peptida from both NTT and strain Katha isolates which had a logscore value above 1. 2019 Thesis NonPeerReviewed text id http://repository.unair.ac.id/83352/1/TPKMV.%2006-19%20%20Dew%20a%20Abstrak.pdf text id http://repository.unair.ac.id/83352/2/TPKMV.%2006-19%20%20Dew%20a.pdf ARINI RAHMI DEWI, 061514253020 (2019) ANALISIS HOMOLOGI, PHYLOGENETIC TREE DAN PREDIKSI EPITOP GEN PENYANDI 37 kDa ompA DARI ISOLAT Pasteurella multocida ASAL NUSA TENGGARA TIMUR PENELITIAN EKSPLORATIF LABORATORIS. Thesis thesis, Universitas Airlangga. http://lib.unair.ac.id |
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SF600-1100 Veterinary medicine ARINI RAHMI DEWI, 061514253020 ANALISIS HOMOLOGI, PHYLOGENETIC TREE DAN PREDIKSI EPITOP GEN PENYANDI 37 kDa ompA DARI ISOLAT Pasteurella multocida ASAL NUSA TENGGARA TIMUR PENELITIAN EKSPLORATIF LABORATORIS |
description |
Thirty seven kDa omp A gene of Pasteurella multocida isolates from NTT buffalo, NTT cattle, and Katha strains were analyzed nucleotide sequence homology and phylogenetic tree with ruminant isolates from various countries in the world: India, China, Iran, and USA from GenBank data and B cell epitope predictions from both NTT isolates. Three Nucleotide sequences from three isolates were homology analyzed using BLAST at NCBI then phylogenetic tree using MEGA-X program and epitope prediction by online program at IEDB. The results showed 93-100% homology, phylogenetic tree of buffalo isolate and strain Katha with bovine from India, China, and Iran; buffalo from India; yak from China; calf from India; and cattle from India. Prediction tools found 5 peptida from both NTT and strain Katha isolates which had a logscore value above 1. |
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Theses and Dissertations NonPeerReviewed |
author |
ARINI RAHMI DEWI, 061514253020 |
author_facet |
ARINI RAHMI DEWI, 061514253020 |
author_sort |
ARINI RAHMI DEWI, 061514253020 |
title |
ANALISIS HOMOLOGI, PHYLOGENETIC TREE DAN PREDIKSI EPITOP GEN PENYANDI 37 kDa ompA DARI ISOLAT Pasteurella multocida ASAL NUSA TENGGARA TIMUR PENELITIAN EKSPLORATIF LABORATORIS |
title_short |
ANALISIS HOMOLOGI, PHYLOGENETIC TREE DAN PREDIKSI EPITOP GEN PENYANDI 37 kDa ompA DARI ISOLAT Pasteurella multocida ASAL NUSA TENGGARA TIMUR PENELITIAN EKSPLORATIF LABORATORIS |
title_full |
ANALISIS HOMOLOGI, PHYLOGENETIC TREE DAN PREDIKSI EPITOP GEN PENYANDI 37 kDa ompA DARI ISOLAT Pasteurella multocida ASAL NUSA TENGGARA TIMUR PENELITIAN EKSPLORATIF LABORATORIS |
title_fullStr |
ANALISIS HOMOLOGI, PHYLOGENETIC TREE DAN PREDIKSI EPITOP GEN PENYANDI 37 kDa ompA DARI ISOLAT Pasteurella multocida ASAL NUSA TENGGARA TIMUR PENELITIAN EKSPLORATIF LABORATORIS |
title_full_unstemmed |
ANALISIS HOMOLOGI, PHYLOGENETIC TREE DAN PREDIKSI EPITOP GEN PENYANDI 37 kDa ompA DARI ISOLAT Pasteurella multocida ASAL NUSA TENGGARA TIMUR PENELITIAN EKSPLORATIF LABORATORIS |
title_sort |
analisis homologi, phylogenetic tree dan prediksi epitop gen penyandi 37 kda ompa dari isolat pasteurella multocida asal nusa tenggara timur penelitian eksploratif laboratoris |
publishDate |
2019 |
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http://repository.unair.ac.id/83352/1/TPKMV.%2006-19%20%20Dew%20a%20Abstrak.pdf http://repository.unair.ac.id/83352/2/TPKMV.%2006-19%20%20Dew%20a.pdf http://repository.unair.ac.id/83352/ http://lib.unair.ac.id |
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1681151718867337216 |