The Genetic Variation Analysis of Temulawak (Curcuma xanthorrhiza Roxb.) In Java Island Using Random Amplification of Polymorphic DNA (RAPD) Method

Temulawak (Curcuma xanthorrhiza Roxb.) or Javanese Turmeric is originated from Indonesia and found throughout Java Island, Bali, and Moluccas. In Indonesia, Temulawak is used as a traditional medicine to cure various diseases. However, not many researches on the...

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Main Authors: Daryono, Budi Setiadi, Hastuti, ., Rahmani, Tara Puri Ducha
Format: Conference or Workshop Item PeerReviewed
Language:English
Published: 2011
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Online Access:https://repository.ugm.ac.id/37693/1/Proceedings_IST_2011_Tara.pdf
https://repository.ugm.ac.id/37693/
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Institution: Universitas Gadjah Mada
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spelling id-ugm-repo.376932014-07-21T04:08:29Z https://repository.ugm.ac.id/37693/ The Genetic Variation Analysis of Temulawak (Curcuma xanthorrhiza Roxb.) In Java Island Using Random Amplification of Polymorphic DNA (RAPD) Method Daryono, Budi Setiadi Hastuti, . Rahmani, Tara Puri Ducha Agricultural Land Management Temulawak (Curcuma xanthorrhiza Roxb.) or Javanese Turmeric is originated from Indonesia and found throughout Java Island, Bali, and Moluccas. In Indonesia, Temulawak is used as a traditional medicine to cure various diseases. However, not many researches on the genetic variation of Temulawak have been conducted, especially the genetic variation of Temulawak throughout Java Island. Such research is important to be done for promoting Temulawak nationally and internationally as a platinum variety originated from Indonesia. Therefore, this research was aimed to analyze the genetic variation of Temulawak found in some areas in Java Island. The method used was Random Amplification of Polymorphic DNA (RAPD). Eleven DNA samples of Temulawak were isolated from Nganjuk (East Java), Kulonprogo (Yogyakarta), Kediri (East Java), Karanganyar (Central Java), Boyolali (Central Java), Tasikmalaya (West Java), Purworejo (Central Java), Imogiri (Yogyakarta, labeled as Local variety), Trenggalek (East Java, labeled as Bathok Variety), Pogung (Yogyakarta), and Kadisoka Village (Yogyakarta). Those DNAs were then amplified using Polymerase Chain Reaction (PCR) with arbitrary primers. The PCR results then were scored and analyzed using NTSYS -pc 21 version 2.1.1 Software. The results revealed that all of samples were divided into three main clusters based on their genetic relatedness. The first cluster consisted of Temulawak from Nganjuk, Kulonprogo, Kediri, Karanganyar, Boyolali, and Tasikmalaya. Those varieties had a close genetic relatedness and might be originated from one variety of Temulawak. The second cluster was only consisted of samples from Purworejo, which means that Temulawak from Purworejo is genetically distinct from the rest of the samples. The third cluster consisted of Temulawak from Pogung and Kadisoka Village which they are closely related. It could be concluded that the genetic variation of Temulawak in Java is divided into three genetic clusters. Keywords: Temulawak, Genetic Variation, RAPD 2011-12 Conference or Workshop Item PeerReviewed application/pdf en https://repository.ugm.ac.id/37693/1/Proceedings_IST_2011_Tara.pdf Daryono, Budi Setiadi and Hastuti, . and Rahmani, Tara Puri Ducha (2011) The Genetic Variation Analysis of Temulawak (Curcuma xanthorrhiza Roxb.) In Java Island Using Random Amplification of Polymorphic DNA (RAPD) Method. In: International Symposium on Temulawak, Desember 2011, Bogor, Indonesia.
institution Universitas Gadjah Mada
building UGM Library
country Indonesia
collection Repository Civitas UGM
language English
topic Agricultural Land Management
spellingShingle Agricultural Land Management
Daryono, Budi Setiadi
Hastuti, .
Rahmani, Tara Puri Ducha
The Genetic Variation Analysis of Temulawak (Curcuma xanthorrhiza Roxb.) In Java Island Using Random Amplification of Polymorphic DNA (RAPD) Method
description Temulawak (Curcuma xanthorrhiza Roxb.) or Javanese Turmeric is originated from Indonesia and found throughout Java Island, Bali, and Moluccas. In Indonesia, Temulawak is used as a traditional medicine to cure various diseases. However, not many researches on the genetic variation of Temulawak have been conducted, especially the genetic variation of Temulawak throughout Java Island. Such research is important to be done for promoting Temulawak nationally and internationally as a platinum variety originated from Indonesia. Therefore, this research was aimed to analyze the genetic variation of Temulawak found in some areas in Java Island. The method used was Random Amplification of Polymorphic DNA (RAPD). Eleven DNA samples of Temulawak were isolated from Nganjuk (East Java), Kulonprogo (Yogyakarta), Kediri (East Java), Karanganyar (Central Java), Boyolali (Central Java), Tasikmalaya (West Java), Purworejo (Central Java), Imogiri (Yogyakarta, labeled as Local variety), Trenggalek (East Java, labeled as Bathok Variety), Pogung (Yogyakarta), and Kadisoka Village (Yogyakarta). Those DNAs were then amplified using Polymerase Chain Reaction (PCR) with arbitrary primers. The PCR results then were scored and analyzed using NTSYS -pc 21 version 2.1.1 Software. The results revealed that all of samples were divided into three main clusters based on their genetic relatedness. The first cluster consisted of Temulawak from Nganjuk, Kulonprogo, Kediri, Karanganyar, Boyolali, and Tasikmalaya. Those varieties had a close genetic relatedness and might be originated from one variety of Temulawak. The second cluster was only consisted of samples from Purworejo, which means that Temulawak from Purworejo is genetically distinct from the rest of the samples. The third cluster consisted of Temulawak from Pogung and Kadisoka Village which they are closely related. It could be concluded that the genetic variation of Temulawak in Java is divided into three genetic clusters. Keywords: Temulawak, Genetic Variation, RAPD
format Conference or Workshop Item
PeerReviewed
author Daryono, Budi Setiadi
Hastuti, .
Rahmani, Tara Puri Ducha
author_facet Daryono, Budi Setiadi
Hastuti, .
Rahmani, Tara Puri Ducha
author_sort Daryono, Budi Setiadi
title The Genetic Variation Analysis of Temulawak (Curcuma xanthorrhiza Roxb.) In Java Island Using Random Amplification of Polymorphic DNA (RAPD) Method
title_short The Genetic Variation Analysis of Temulawak (Curcuma xanthorrhiza Roxb.) In Java Island Using Random Amplification of Polymorphic DNA (RAPD) Method
title_full The Genetic Variation Analysis of Temulawak (Curcuma xanthorrhiza Roxb.) In Java Island Using Random Amplification of Polymorphic DNA (RAPD) Method
title_fullStr The Genetic Variation Analysis of Temulawak (Curcuma xanthorrhiza Roxb.) In Java Island Using Random Amplification of Polymorphic DNA (RAPD) Method
title_full_unstemmed The Genetic Variation Analysis of Temulawak (Curcuma xanthorrhiza Roxb.) In Java Island Using Random Amplification of Polymorphic DNA (RAPD) Method
title_sort genetic variation analysis of temulawak (curcuma xanthorrhiza roxb.) in java island using random amplification of polymorphic dna (rapd) method
publishDate 2011
url https://repository.ugm.ac.id/37693/1/Proceedings_IST_2011_Tara.pdf
https://repository.ugm.ac.id/37693/
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