Study on genetic variability of mud crab, Scylla olivacea at east coast of Peninsular Malaysia using random amplified polymorphic DNA (RAPD): a preliminary assessment

Scylla olivacea is one of the mud crabs species and become source of economic income especially for local fishermen in Setiu Wetlands. Nevertheless, the genetic variability of this species are still poorly studied and need to be further clarified. Thus, the Random Amplified Polymorphic DNA-Polymer...

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Main Authors: Wan Bayani Wan Omar, Faridah Mohamad, Ikhwanuddin @ Polity Abdullah, Mohd Firdaus Zainal Abidin
Format: Article
Language:English
Published: Penerbit Universiti Kebangsaan Malaysia 2019
Online Access:http://journalarticle.ukm.my/12770/1/48_01_03.pdf
http://journalarticle.ukm.my/12770/
http://mabjournal.com/index.php?option=com_content&view=article&id=897&catid=59:current-view&Itemid=56
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Institution: Universiti Kebangsaan Malaysia
Language: English
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spelling my-ukm.journal.127702019-04-16T09:04:55Z http://journalarticle.ukm.my/12770/ Study on genetic variability of mud crab, Scylla olivacea at east coast of Peninsular Malaysia using random amplified polymorphic DNA (RAPD): a preliminary assessment Wan Bayani Wan Omar, Faridah Mohamad, Ikhwanuddin @ Polity Abdullah, Mohd Firdaus Zainal Abidin, Scylla olivacea is one of the mud crabs species and become source of economic income especially for local fishermen in Setiu Wetlands. Nevertheless, the genetic variability of this species are still poorly studied and need to be further clarified. Thus, the Random Amplified Polymorphic DNA-Polymerase Chain Reaction (RAPD-PCR) technique was used to examine the genetic variability among individuals of S. olivacea from Setiu Wetlands, Terengganu. The genomic DNA was extracted from ten samples of mud crab by using DNeasy kit. Twenty reproducible RAPD fragments generated by OPA 08 and OPA 10 with 17 fragments were polymorphic. The percentage of polymorphic bands was 85% indicates that the population of S. olivacea has high level of polymorphism due to low inbreeding factor within a population. High polymorphism of S. olivacea revealed that this species are genetically variable. Further study should be done for a better understanding about variation and also for conservation and management of this species. Penerbit Universiti Kebangsaan Malaysia 2019-03 Article PeerReviewed application/pdf en http://journalarticle.ukm.my/12770/1/48_01_03.pdf Wan Bayani Wan Omar, and Faridah Mohamad, and Ikhwanuddin @ Polity Abdullah, and Mohd Firdaus Zainal Abidin, (2019) Study on genetic variability of mud crab, Scylla olivacea at east coast of Peninsular Malaysia using random amplified polymorphic DNA (RAPD): a preliminary assessment. Malaysian Applied Biology, 48 (1). pp. 15-19. ISSN 0126-8643 http://mabjournal.com/index.php?option=com_content&view=article&id=897&catid=59:current-view&Itemid=56
institution Universiti Kebangsaan Malaysia
building Perpustakaan Tun Sri Lanang Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Kebangsaan Malaysia
content_source UKM Journal Article Repository
url_provider http://journalarticle.ukm.my/
language English
description Scylla olivacea is one of the mud crabs species and become source of economic income especially for local fishermen in Setiu Wetlands. Nevertheless, the genetic variability of this species are still poorly studied and need to be further clarified. Thus, the Random Amplified Polymorphic DNA-Polymerase Chain Reaction (RAPD-PCR) technique was used to examine the genetic variability among individuals of S. olivacea from Setiu Wetlands, Terengganu. The genomic DNA was extracted from ten samples of mud crab by using DNeasy kit. Twenty reproducible RAPD fragments generated by OPA 08 and OPA 10 with 17 fragments were polymorphic. The percentage of polymorphic bands was 85% indicates that the population of S. olivacea has high level of polymorphism due to low inbreeding factor within a population. High polymorphism of S. olivacea revealed that this species are genetically variable. Further study should be done for a better understanding about variation and also for conservation and management of this species.
format Article
author Wan Bayani Wan Omar,
Faridah Mohamad,
Ikhwanuddin @ Polity Abdullah,
Mohd Firdaus Zainal Abidin,
spellingShingle Wan Bayani Wan Omar,
Faridah Mohamad,
Ikhwanuddin @ Polity Abdullah,
Mohd Firdaus Zainal Abidin,
Study on genetic variability of mud crab, Scylla olivacea at east coast of Peninsular Malaysia using random amplified polymorphic DNA (RAPD): a preliminary assessment
author_facet Wan Bayani Wan Omar,
Faridah Mohamad,
Ikhwanuddin @ Polity Abdullah,
Mohd Firdaus Zainal Abidin,
author_sort Wan Bayani Wan Omar,
title Study on genetic variability of mud crab, Scylla olivacea at east coast of Peninsular Malaysia using random amplified polymorphic DNA (RAPD): a preliminary assessment
title_short Study on genetic variability of mud crab, Scylla olivacea at east coast of Peninsular Malaysia using random amplified polymorphic DNA (RAPD): a preliminary assessment
title_full Study on genetic variability of mud crab, Scylla olivacea at east coast of Peninsular Malaysia using random amplified polymorphic DNA (RAPD): a preliminary assessment
title_fullStr Study on genetic variability of mud crab, Scylla olivacea at east coast of Peninsular Malaysia using random amplified polymorphic DNA (RAPD): a preliminary assessment
title_full_unstemmed Study on genetic variability of mud crab, Scylla olivacea at east coast of Peninsular Malaysia using random amplified polymorphic DNA (RAPD): a preliminary assessment
title_sort study on genetic variability of mud crab, scylla olivacea at east coast of peninsular malaysia using random amplified polymorphic dna (rapd): a preliminary assessment
publisher Penerbit Universiti Kebangsaan Malaysia
publishDate 2019
url http://journalarticle.ukm.my/12770/1/48_01_03.pdf
http://journalarticle.ukm.my/12770/
http://mabjournal.com/index.php?option=com_content&view=article&id=897&catid=59:current-view&Itemid=56
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