Interaction of the nanobio-based reagent with sodium fluorescein and lipids via bioinformatics for forensic fingerprint visualisations

Being commonly found at crime scenes, fingerprints are crucial for human identification, attributable to their uniqueness, persistence and systematic classification of ridge patterns. In addition to latent fingerprints being invisible to the naked eye, the escalating trends of disposing forensic ev...

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Main Authors: Lin, Khor Tze, Mahat, Naji Arafat, Azman, Aida Rasyidah, Abdul Wahab, Roswanira, Oyewusi, Habeebat Adekilekun, Abdul Hamid, Azzmer Azzar
Format: Article
Language:English
English
Published: Taylor & Francis 2023
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Online Access:http://irep.iium.edu.my/104357/3/104357_%20Interaction%20of%20the%20nanobio-based%20reagent%20with%20sodium%20fluorescein.pdf
http://irep.iium.edu.my/104357/4/104357_Interaction%20of%20the%20nanobio-based%20reagent%20with%20sodium%20fluorescein_SCOPUS.pdf
http://irep.iium.edu.my/104357/
https://www.tandfonline.com/doi/abs/10.1080/07391102.2023.2186709
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spelling my.iium.irep.1043572024-05-16T02:13:30Z http://irep.iium.edu.my/104357/ Interaction of the nanobio-based reagent with sodium fluorescein and lipids via bioinformatics for forensic fingerprint visualisations Lin, Khor Tze Mahat, Naji Arafat Azman, Aida Rasyidah Abdul Wahab, Roswanira Oyewusi, Habeebat Adekilekun Abdul Hamid, Azzmer Azzar QD Chemistry Being commonly found at crime scenes, fingerprints are crucial for human identification, attributable to their uniqueness, persistence and systematic classification of ridge patterns. In addition to latent fingerprints being invisible to the naked eye, the escalating trends of disposing forensic evidence bearing such prints in watery bodies would further complicate criminal investigations. Taking into account the toxicity of small particle reagent (SPR) commonly used in visualising latent fingerprints on wet and non-porous objects, a greener alternative using the nanobio-based reagent (NBR) has been suggested. However, NBR only applies to white and/or relatively light-coloured objects. Thus, conjugation of sodium fluorescein dye with NBR (f-NBR) may be beneficial for increasing the contrast of fingerprint on multi-colored objects. Hence, this study was aimed at investigating the possibility of such conjugation (i.e., f-NBR) as well as proposing suitable interactions between the f-NBR and lipid constituents of fingerprints (tetra-, hexa- and octadecanoic acids) via molecular docking and molecular dynamics simulations. The binding energies between CRL with its ligands were observed at �8.1, �5.0, �4.9 and �3.6 kcal/mole for sodium fluorescein, tetra-, hexa- and octadecanoic acids, respectively. Besides, the formations of hydrogen bonds observed in all complexes (ranged between 2.6 and 3.4 Å), further supported by the stabilized root mean square deviation (RMSDs) plots in MD simulations. In short, the conjugation of f-NBR was computationally feasible, and thereby merits further investigations in the laboratory Taylor & Francis 2023-03-07 Article PeerReviewed application/pdf en http://irep.iium.edu.my/104357/3/104357_%20Interaction%20of%20the%20nanobio-based%20reagent%20with%20sodium%20fluorescein.pdf application/pdf en http://irep.iium.edu.my/104357/4/104357_Interaction%20of%20the%20nanobio-based%20reagent%20with%20sodium%20fluorescein_SCOPUS.pdf Lin, Khor Tze and Mahat, Naji Arafat and Azman, Aida Rasyidah and Abdul Wahab, Roswanira and Oyewusi, Habeebat Adekilekun and Abdul Hamid, Azzmer Azzar (2023) Interaction of the nanobio-based reagent with sodium fluorescein and lipids via bioinformatics for forensic fingerprint visualisations. Journal of Biomolecular Structure and Dynamics, 41 (24). pp. 15045-15052. ISSN 0739-1102 E-ISSN 1538-0254 https://www.tandfonline.com/doi/abs/10.1080/07391102.2023.2186709 10.1080/07391102.2023.2186709
institution Universiti Islam Antarabangsa Malaysia
building IIUM Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider International Islamic University Malaysia
content_source IIUM Repository (IREP)
url_provider http://irep.iium.edu.my/
language English
English
topic QD Chemistry
spellingShingle QD Chemistry
Lin, Khor Tze
Mahat, Naji Arafat
Azman, Aida Rasyidah
Abdul Wahab, Roswanira
Oyewusi, Habeebat Adekilekun
Abdul Hamid, Azzmer Azzar
Interaction of the nanobio-based reagent with sodium fluorescein and lipids via bioinformatics for forensic fingerprint visualisations
description Being commonly found at crime scenes, fingerprints are crucial for human identification, attributable to their uniqueness, persistence and systematic classification of ridge patterns. In addition to latent fingerprints being invisible to the naked eye, the escalating trends of disposing forensic evidence bearing such prints in watery bodies would further complicate criminal investigations. Taking into account the toxicity of small particle reagent (SPR) commonly used in visualising latent fingerprints on wet and non-porous objects, a greener alternative using the nanobio-based reagent (NBR) has been suggested. However, NBR only applies to white and/or relatively light-coloured objects. Thus, conjugation of sodium fluorescein dye with NBR (f-NBR) may be beneficial for increasing the contrast of fingerprint on multi-colored objects. Hence, this study was aimed at investigating the possibility of such conjugation (i.e., f-NBR) as well as proposing suitable interactions between the f-NBR and lipid constituents of fingerprints (tetra-, hexa- and octadecanoic acids) via molecular docking and molecular dynamics simulations. The binding energies between CRL with its ligands were observed at �8.1, �5.0, �4.9 and �3.6 kcal/mole for sodium fluorescein, tetra-, hexa- and octadecanoic acids, respectively. Besides, the formations of hydrogen bonds observed in all complexes (ranged between 2.6 and 3.4 Å), further supported by the stabilized root mean square deviation (RMSDs) plots in MD simulations. In short, the conjugation of f-NBR was computationally feasible, and thereby merits further investigations in the laboratory
format Article
author Lin, Khor Tze
Mahat, Naji Arafat
Azman, Aida Rasyidah
Abdul Wahab, Roswanira
Oyewusi, Habeebat Adekilekun
Abdul Hamid, Azzmer Azzar
author_facet Lin, Khor Tze
Mahat, Naji Arafat
Azman, Aida Rasyidah
Abdul Wahab, Roswanira
Oyewusi, Habeebat Adekilekun
Abdul Hamid, Azzmer Azzar
author_sort Lin, Khor Tze
title Interaction of the nanobio-based reagent with sodium fluorescein and lipids via bioinformatics for forensic fingerprint visualisations
title_short Interaction of the nanobio-based reagent with sodium fluorescein and lipids via bioinformatics for forensic fingerprint visualisations
title_full Interaction of the nanobio-based reagent with sodium fluorescein and lipids via bioinformatics for forensic fingerprint visualisations
title_fullStr Interaction of the nanobio-based reagent with sodium fluorescein and lipids via bioinformatics for forensic fingerprint visualisations
title_full_unstemmed Interaction of the nanobio-based reagent with sodium fluorescein and lipids via bioinformatics for forensic fingerprint visualisations
title_sort interaction of the nanobio-based reagent with sodium fluorescein and lipids via bioinformatics for forensic fingerprint visualisations
publisher Taylor & Francis
publishDate 2023
url http://irep.iium.edu.my/104357/3/104357_%20Interaction%20of%20the%20nanobio-based%20reagent%20with%20sodium%20fluorescein.pdf
http://irep.iium.edu.my/104357/4/104357_Interaction%20of%20the%20nanobio-based%20reagent%20with%20sodium%20fluorescein_SCOPUS.pdf
http://irep.iium.edu.my/104357/
https://www.tandfonline.com/doi/abs/10.1080/07391102.2023.2186709
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