Weighted average ensemble deep learning model for stratification of brain tumor in MRI images

Abstract: Brain tumor diagnosis at an early stage can improve the chances of successful treatment and better patient outcomes. In the biomedical industry, non-invasive diagnostic procedures, such as magnetic resonance imaging (MRI), can be used to diagnose brain tumors. Deep learning, a type of a...

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Main Authors: Anand, Vatsala, Gupta, Sheifali, Gupta, Deepali, Gulzar, Yonis, Qin, Xin, Juneja, Sapna, Shah, Asadullah, Shaikh, Asadullah
Format: Article
Language:English
English
Published: MDPI 2023
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Online Access:http://irep.iium.edu.my/104496/2/104496_Weighted%20average%20ensemble.pdf
http://irep.iium.edu.my/104496/8/104496_Weighted%20Average%20Ensemble%20Deep%20Learning%20Model%20for%20Stratification%20of%20Brain%20Tumor%20in%20MRI%20Images%20_SCOPUS.pdf
http://irep.iium.edu.my/104496/
https://www.mdpi.com/2075-4418/13/7/1320
https://doi.org/10.3390/ diagnostics13071320
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Institution: Universiti Islam Antarabangsa Malaysia
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spelling my.iium.irep.1044962024-01-18T02:58:19Z http://irep.iium.edu.my/104496/ Weighted average ensemble deep learning model for stratification of brain tumor in MRI images Anand, Vatsala Gupta, Sheifali Gupta, Deepali Gulzar, Yonis Qin, Xin Juneja, Sapna Shah, Asadullah Shaikh, Asadullah T10.5 Communication of technical information Abstract: Brain tumor diagnosis at an early stage can improve the chances of successful treatment and better patient outcomes. In the biomedical industry, non-invasive diagnostic procedures, such as magnetic resonance imaging (MRI), can be used to diagnose brain tumors. Deep learning, a type of artificial intelligence, can analyze MRI images in a matter of seconds, reducing the time it takes for diagnosis and potentially improving patient outcomes. Furthermore, an ensemble model can help increase the accuracy of classification by combining the strengths of multiple models and compensating for their individual weaknesses. Therefore, in this research, a weighted average ensemble deep learning model is proposed for the classification of brain tumors. For the weighted ensemble classification model, three different feature spaces are taken from the transfer learning VGG19 model, Convolution Neural Network (CNN) model without augmentation, and CNN model with augmentation. These three feature spaces are ensembled with the best combination of weights, i.e., weight1, weight2, and weight3 by using grid search. The dataset used for simulation is taken from The Cancer Genome Atlas (TCGA), having a lower-grade glioma collection with 3929 MRI images of 110 patients. The ensemble model helps reduce overfitting by combining multiple models that have learned different aspects of the data. The proposed ensemble model outperforms the three individual models for detecting brain tumors in terms of accuracy, precision, and F1-score. Therefore, the proposed model can act as a second opinion tool for radiologists to diagnose the tumor from MRI images of the brain. MDPI 2023-04-02 Article PeerReviewed application/pdf en http://irep.iium.edu.my/104496/2/104496_Weighted%20average%20ensemble.pdf application/pdf en http://irep.iium.edu.my/104496/8/104496_Weighted%20Average%20Ensemble%20Deep%20Learning%20Model%20for%20Stratification%20of%20Brain%20Tumor%20in%20MRI%20Images%20_SCOPUS.pdf Anand, Vatsala and Gupta, Sheifali and Gupta, Deepali and Gulzar, Yonis and Qin, Xin and Juneja, Sapna and Shah, Asadullah and Shaikh, Asadullah (2023) Weighted average ensemble deep learning model for stratification of brain tumor in MRI images. Diagnostics, 13 (7). pp. 1-13. E-ISSN 2075-4418 https://www.mdpi.com/2075-4418/13/7/1320 https://doi.org/10.3390/ diagnostics13071320
institution Universiti Islam Antarabangsa Malaysia
building IIUM Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider International Islamic University Malaysia
content_source IIUM Repository (IREP)
url_provider http://irep.iium.edu.my/
language English
English
topic T10.5 Communication of technical information
spellingShingle T10.5 Communication of technical information
Anand, Vatsala
Gupta, Sheifali
Gupta, Deepali
Gulzar, Yonis
Qin, Xin
Juneja, Sapna
Shah, Asadullah
Shaikh, Asadullah
Weighted average ensemble deep learning model for stratification of brain tumor in MRI images
description Abstract: Brain tumor diagnosis at an early stage can improve the chances of successful treatment and better patient outcomes. In the biomedical industry, non-invasive diagnostic procedures, such as magnetic resonance imaging (MRI), can be used to diagnose brain tumors. Deep learning, a type of artificial intelligence, can analyze MRI images in a matter of seconds, reducing the time it takes for diagnosis and potentially improving patient outcomes. Furthermore, an ensemble model can help increase the accuracy of classification by combining the strengths of multiple models and compensating for their individual weaknesses. Therefore, in this research, a weighted average ensemble deep learning model is proposed for the classification of brain tumors. For the weighted ensemble classification model, three different feature spaces are taken from the transfer learning VGG19 model, Convolution Neural Network (CNN) model without augmentation, and CNN model with augmentation. These three feature spaces are ensembled with the best combination of weights, i.e., weight1, weight2, and weight3 by using grid search. The dataset used for simulation is taken from The Cancer Genome Atlas (TCGA), having a lower-grade glioma collection with 3929 MRI images of 110 patients. The ensemble model helps reduce overfitting by combining multiple models that have learned different aspects of the data. The proposed ensemble model outperforms the three individual models for detecting brain tumors in terms of accuracy, precision, and F1-score. Therefore, the proposed model can act as a second opinion tool for radiologists to diagnose the tumor from MRI images of the brain.
format Article
author Anand, Vatsala
Gupta, Sheifali
Gupta, Deepali
Gulzar, Yonis
Qin, Xin
Juneja, Sapna
Shah, Asadullah
Shaikh, Asadullah
author_facet Anand, Vatsala
Gupta, Sheifali
Gupta, Deepali
Gulzar, Yonis
Qin, Xin
Juneja, Sapna
Shah, Asadullah
Shaikh, Asadullah
author_sort Anand, Vatsala
title Weighted average ensemble deep learning model for stratification of brain tumor in MRI images
title_short Weighted average ensemble deep learning model for stratification of brain tumor in MRI images
title_full Weighted average ensemble deep learning model for stratification of brain tumor in MRI images
title_fullStr Weighted average ensemble deep learning model for stratification of brain tumor in MRI images
title_full_unstemmed Weighted average ensemble deep learning model for stratification of brain tumor in MRI images
title_sort weighted average ensemble deep learning model for stratification of brain tumor in mri images
publisher MDPI
publishDate 2023
url http://irep.iium.edu.my/104496/2/104496_Weighted%20average%20ensemble.pdf
http://irep.iium.edu.my/104496/8/104496_Weighted%20Average%20Ensemble%20Deep%20Learning%20Model%20for%20Stratification%20of%20Brain%20Tumor%20in%20MRI%20Images%20_SCOPUS.pdf
http://irep.iium.edu.my/104496/
https://www.mdpi.com/2075-4418/13/7/1320
https://doi.org/10.3390/ diagnostics13071320
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