Segmentation of left ventricle in late gadolinium enhanced MRI through 2D‐4D registration for infarct localization in 3D patient‐specific left ventricular model
Purpose: To evaluate a 2D-4D registration-cum-segmentation framework for the delineation of left ventricle (LV) in late gadolinium enhanced (LGE) MRI and for the localization of infarcts in patient-specific 3D LV models. Methods: A 3-step framework was proposed, consisting of: (1) 3D LV model recons...
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my.um.eprints.200392019-01-17T03:42:54Z http://eprints.um.edu.my/20039/ Segmentation of left ventricle in late gadolinium enhanced MRI through 2D‐4D registration for infarct localization in 3D patient‐specific left ventricular model Leong, Chen Onn Lim, Einly Tan, Li Kuo Abdul Aziz, Yang Faridah Sridhar, Ganiga Srinivasaiah Socrates, Dokos Chee, Kok Han Lee, Zhen Vin Liew, Yih Miin R Medicine TA Engineering (General). Civil engineering (General) Purpose: To evaluate a 2D-4D registration-cum-segmentation framework for the delineation of left ventricle (LV) in late gadolinium enhanced (LGE) MRI and for the localization of infarcts in patient-specific 3D LV models. Methods: A 3-step framework was proposed, consisting of: (1) 3D LV model reconstruction from motion-corrected 4D cine-MRI; (2) Registration of 2D LGE-MRI with 4D cine-MRI; (3) LV contour extraction from the intersection of LGE slices with the LV model. The framework was evaluated against cardiac MRI data from 27 patients scanned within 6 months after acute myocardial infarction. We compared the use of local Pearson's correlation (LPC) and normalized mutual information (NMI) as similarity measures for the registration. The use of 2 and 6 long-axis (LA) cine-MRI scans was also compared. The accuracy of the framework was evaluated using manual segmentation, and the interobserver variability of the scar volume derived from the segmented LV was determined using Bland-Altman analysis. Results: LPC outperformed NMI as a similarity measure for the proposed framework using 6 LA scans, with Hausdorrf distance (HD) of 1.19 ± 0.53 mm versus 1.51 ± 2.01 mm (endocardial) and 1.21 ± 0.48 mm versus 1.46 ± 1.78 mm (epicardial), respectively. Segmentation using 2 LA scans was comparable to 6 LA scans with a HD of 1.23 ± 0.70 mm (endocardial) and 1.25 ± 0.74 mm (epicardial). The framework yielded a lower interobserver variability in scar volumes compared with manual segmentation. Conclusion: The framework showed high accuracy and robustness in delineating LV in LGE-MRI and allowed for bidirectional mapping of information between LGE- and cine-MRI scans, crucial in personalized model studies for treatment planning. Wiley 2019 Article PeerReviewed Leong, Chen Onn and Lim, Einly and Tan, Li Kuo and Abdul Aziz, Yang Faridah and Sridhar, Ganiga Srinivasaiah and Socrates, Dokos and Chee, Kok Han and Lee, Zhen Vin and Liew, Yih Miin (2019) Segmentation of left ventricle in late gadolinium enhanced MRI through 2D‐4D registration for infarct localization in 3D patient‐specific left ventricular model. Magnetic Resonance in Medicine, 81 (2). pp. 1385-1398. ISSN 0740-3194 https://doi.org/10.1002/mrm.27486 doi:10.1002/mrm.27486 |
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R Medicine TA Engineering (General). Civil engineering (General) Leong, Chen Onn Lim, Einly Tan, Li Kuo Abdul Aziz, Yang Faridah Sridhar, Ganiga Srinivasaiah Socrates, Dokos Chee, Kok Han Lee, Zhen Vin Liew, Yih Miin Segmentation of left ventricle in late gadolinium enhanced MRI through 2D‐4D registration for infarct localization in 3D patient‐specific left ventricular model |
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Purpose: To evaluate a 2D-4D registration-cum-segmentation framework for the delineation of left ventricle (LV) in late gadolinium enhanced (LGE) MRI and for the localization of infarcts in patient-specific 3D LV models. Methods: A 3-step framework was proposed, consisting of: (1) 3D LV model reconstruction from motion-corrected 4D cine-MRI; (2) Registration of 2D LGE-MRI with 4D cine-MRI; (3) LV contour extraction from the intersection of LGE slices with the LV model. The framework was evaluated against cardiac MRI data from 27 patients scanned within 6 months after acute myocardial infarction. We compared the use of local Pearson's correlation (LPC) and normalized mutual information (NMI) as similarity measures for the registration. The use of 2 and 6 long-axis (LA) cine-MRI scans was also compared. The accuracy of the framework was evaluated using manual segmentation, and the interobserver variability of the scar volume derived from the segmented LV was determined using Bland-Altman analysis. Results: LPC outperformed NMI as a similarity measure for the proposed framework using 6 LA scans, with Hausdorrf distance (HD) of 1.19 ± 0.53 mm versus 1.51 ± 2.01 mm (endocardial) and 1.21 ± 0.48 mm versus 1.46 ± 1.78 mm (epicardial), respectively. Segmentation using 2 LA scans was comparable to 6 LA scans with a HD of 1.23 ± 0.70 mm (endocardial) and 1.25 ± 0.74 mm (epicardial). The framework yielded a lower interobserver variability in scar volumes compared with manual segmentation. Conclusion: The framework showed high accuracy and robustness in delineating LV in LGE-MRI and allowed for bidirectional mapping of information between LGE- and cine-MRI scans, crucial in personalized model studies for treatment planning. |
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Article |
author |
Leong, Chen Onn Lim, Einly Tan, Li Kuo Abdul Aziz, Yang Faridah Sridhar, Ganiga Srinivasaiah Socrates, Dokos Chee, Kok Han Lee, Zhen Vin Liew, Yih Miin |
author_facet |
Leong, Chen Onn Lim, Einly Tan, Li Kuo Abdul Aziz, Yang Faridah Sridhar, Ganiga Srinivasaiah Socrates, Dokos Chee, Kok Han Lee, Zhen Vin Liew, Yih Miin |
author_sort |
Leong, Chen Onn |
title |
Segmentation of left ventricle in late gadolinium enhanced MRI through 2D‐4D registration for infarct localization in 3D patient‐specific left ventricular model |
title_short |
Segmentation of left ventricle in late gadolinium enhanced MRI through 2D‐4D registration for infarct localization in 3D patient‐specific left ventricular model |
title_full |
Segmentation of left ventricle in late gadolinium enhanced MRI through 2D‐4D registration for infarct localization in 3D patient‐specific left ventricular model |
title_fullStr |
Segmentation of left ventricle in late gadolinium enhanced MRI through 2D‐4D registration for infarct localization in 3D patient‐specific left ventricular model |
title_full_unstemmed |
Segmentation of left ventricle in late gadolinium enhanced MRI through 2D‐4D registration for infarct localization in 3D patient‐specific left ventricular model |
title_sort |
segmentation of left ventricle in late gadolinium enhanced mri through 2d‐4d registration for infarct localization in 3d patient‐specific left ventricular model |
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Wiley |
publishDate |
2019 |
url |
http://eprints.um.edu.my/20039/ https://doi.org/10.1002/mrm.27486 |
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1643691161026560000 |