Automated Identification of Malaria-Infected Cells and Classification of Human Malaria Parasites Using a Two-Stage Deep Learning Technique

The gold standard for diagnosing malaria remains microscopic examination; however, its application is frequently impeded by the lack of a standardized framework that guarantees uniformity and quality, particularly in scenarios with limited resources and high volume. This study suggests a novel and h...

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Main Authors: Sukumarran, Dhevisha, Loh, Ee Sam, Khairuddin, Anis Salwa Mohd, Ngui, Romano, Sulaiman, Wan Yusoff Wan, Vythilingam, Indra, Divis, Paul Cliff Simon, Hasikin, Khairunnisa
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Published: Institute of Electrical and Electronics Engineers 2024
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Online Access:http://eprints.um.edu.my/47116/
https://doi.org/10.1109/ACCESS.2024.3459411
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spelling my.um.eprints.471162024-11-28T02:04:53Z http://eprints.um.edu.my/47116/ Automated Identification of Malaria-Infected Cells and Classification of Human Malaria Parasites Using a Two-Stage Deep Learning Technique Sukumarran, Dhevisha Loh, Ee Sam Khairuddin, Anis Salwa Mohd Ngui, Romano Sulaiman, Wan Yusoff Wan Vythilingam, Indra Divis, Paul Cliff Simon Hasikin, Khairunnisa QA75 Electronic computers. Computer science TK Electrical engineering. Electronics Nuclear engineering The gold standard for diagnosing malaria remains microscopic examination; however, its application is frequently impeded by the lack of a standardized framework that guarantees uniformity and quality, particularly in scenarios with limited resources and high volume. This study suggests a novel and highly effective automated diagnostic approach that employs deep-learning object detectors to improve the accuracy and efficiency of malaria-infected cell detection and Plasmodium species classification to overcome these challenges. Plasmodium parasites were detected within thin blood stain images using the YOLOv4 and YOLOv5 models, which were optimized for this purpose. YOLOv5 obtains a slightly higher accuracy on the source dataset (mAP@ 0.5=96 %) than YOLOv4 (mAP@ 0.5=89 %), but YOLOv4 exhibits superior robustness and generalization across diverse datasets, as demonstrated by its performance on an independent validation set (mAP@ 0.5=90 %). This robustness emphasizes the dependability of YOLOv4 for deployment in a variety of clinical settings. Furthermore, an automated process was implemented to produce bound single-cell images from YOLOv4's localization outputs, thereby eradicating the necessity for conventional and time-consuming segmentation methods. The DenseNet-121 model, which was optimized for species identification, obtained an impressive overall accuracy of 95.5% in the subsequent classification stage, indicating excellent generalization across all malaria species. Accurate classification of Plasmodium species on microscopically thin blood films is essential for guiding appropriate therapy and preventing unnecessary anti-malarial treatments, which can lead to adverse effects and contribute to drug resistance. This research contributes to the field of automated malaria diagnosis by offering a comprehensive framework that substantially improves clinical decision-making, particularly in resource-limited environments. Institute of Electrical and Electronics Engineers 2024 Article PeerReviewed Sukumarran, Dhevisha and Loh, Ee Sam and Khairuddin, Anis Salwa Mohd and Ngui, Romano and Sulaiman, Wan Yusoff Wan and Vythilingam, Indra and Divis, Paul Cliff Simon and Hasikin, Khairunnisa (2024) Automated Identification of Malaria-Infected Cells and Classification of Human Malaria Parasites Using a Two-Stage Deep Learning Technique. IEEE Access, 12. pp. 135746-135763. ISSN 2169-3536, DOI https://doi.org/10.1109/ACCESS.2024.3459411 <https://doi.org/10.1109/ACCESS.2024.3459411>. https://doi.org/10.1109/ACCESS.2024.3459411 10.1109/ACCESS.2024.3459411
institution Universiti Malaya
building UM Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Malaya
content_source UM Research Repository
url_provider http://eprints.um.edu.my/
topic QA75 Electronic computers. Computer science
TK Electrical engineering. Electronics Nuclear engineering
spellingShingle QA75 Electronic computers. Computer science
TK Electrical engineering. Electronics Nuclear engineering
Sukumarran, Dhevisha
Loh, Ee Sam
Khairuddin, Anis Salwa Mohd
Ngui, Romano
Sulaiman, Wan Yusoff Wan
Vythilingam, Indra
Divis, Paul Cliff Simon
Hasikin, Khairunnisa
Automated Identification of Malaria-Infected Cells and Classification of Human Malaria Parasites Using a Two-Stage Deep Learning Technique
description The gold standard for diagnosing malaria remains microscopic examination; however, its application is frequently impeded by the lack of a standardized framework that guarantees uniformity and quality, particularly in scenarios with limited resources and high volume. This study suggests a novel and highly effective automated diagnostic approach that employs deep-learning object detectors to improve the accuracy and efficiency of malaria-infected cell detection and Plasmodium species classification to overcome these challenges. Plasmodium parasites were detected within thin blood stain images using the YOLOv4 and YOLOv5 models, which were optimized for this purpose. YOLOv5 obtains a slightly higher accuracy on the source dataset (mAP@ 0.5=96 %) than YOLOv4 (mAP@ 0.5=89 %), but YOLOv4 exhibits superior robustness and generalization across diverse datasets, as demonstrated by its performance on an independent validation set (mAP@ 0.5=90 %). This robustness emphasizes the dependability of YOLOv4 for deployment in a variety of clinical settings. Furthermore, an automated process was implemented to produce bound single-cell images from YOLOv4's localization outputs, thereby eradicating the necessity for conventional and time-consuming segmentation methods. The DenseNet-121 model, which was optimized for species identification, obtained an impressive overall accuracy of 95.5% in the subsequent classification stage, indicating excellent generalization across all malaria species. Accurate classification of Plasmodium species on microscopically thin blood films is essential for guiding appropriate therapy and preventing unnecessary anti-malarial treatments, which can lead to adverse effects and contribute to drug resistance. This research contributes to the field of automated malaria diagnosis by offering a comprehensive framework that substantially improves clinical decision-making, particularly in resource-limited environments.
format Article
author Sukumarran, Dhevisha
Loh, Ee Sam
Khairuddin, Anis Salwa Mohd
Ngui, Romano
Sulaiman, Wan Yusoff Wan
Vythilingam, Indra
Divis, Paul Cliff Simon
Hasikin, Khairunnisa
author_facet Sukumarran, Dhevisha
Loh, Ee Sam
Khairuddin, Anis Salwa Mohd
Ngui, Romano
Sulaiman, Wan Yusoff Wan
Vythilingam, Indra
Divis, Paul Cliff Simon
Hasikin, Khairunnisa
author_sort Sukumarran, Dhevisha
title Automated Identification of Malaria-Infected Cells and Classification of Human Malaria Parasites Using a Two-Stage Deep Learning Technique
title_short Automated Identification of Malaria-Infected Cells and Classification of Human Malaria Parasites Using a Two-Stage Deep Learning Technique
title_full Automated Identification of Malaria-Infected Cells and Classification of Human Malaria Parasites Using a Two-Stage Deep Learning Technique
title_fullStr Automated Identification of Malaria-Infected Cells and Classification of Human Malaria Parasites Using a Two-Stage Deep Learning Technique
title_full_unstemmed Automated Identification of Malaria-Infected Cells and Classification of Human Malaria Parasites Using a Two-Stage Deep Learning Technique
title_sort automated identification of malaria-infected cells and classification of human malaria parasites using a two-stage deep learning technique
publisher Institute of Electrical and Electronics Engineers
publishDate 2024
url http://eprints.um.edu.my/47116/
https://doi.org/10.1109/ACCESS.2024.3459411
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