Classification of synthetic platelets in digital holographic microscopy by neural network

Automatic classification of cell types and biological products are considered crucial in the field of hematology especially for early detection of diseases when the quantity that needs to be examined is considerably large. In a previous study, a cylindrical micro-channel was employed to mimic actual...

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Main Authors: Khairul Fikri, Bin Tamrin, Rahmatullah, B.
Format: E-Article
Language:English
Published: Majmuah Enterprise 2019
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Online Access:http://ir.unimas.my/id/eprint/28175/1/Classification%20of%20synthetic%20platelets%20in%20digital%20holographic%20microscopy%20by%20neural%20-%20Copy.pdf
http://ir.unimas.my/id/eprint/28175/
https://majmuah.com/journal/index.php/bij/article/view/32
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Institution: Universiti Malaysia Sarawak
Language: English
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spelling my.unimas.ir.281752019-12-12T01:17:40Z http://ir.unimas.my/id/eprint/28175/ Classification of synthetic platelets in digital holographic microscopy by neural network Khairul Fikri, Bin Tamrin Rahmatullah, B. QC Physics Automatic classification of cell types and biological products are considered crucial in the field of hematology especially for early detection of diseases when the quantity that needs to be examined is considerably large. In a previous study, a cylindrical micro-channel was employed to mimic actual blood flow in the arteriole but it was found to cause astigmatism in the reconstructed holographic particle images. Additionally, correction of the images is important to avoid false disease detection. In this paper, we describe a new application of feed-forward backpropagation neural network for classifying images of astigmatic and non-astigmatic synthetic platelets that were obtained by digital holographic microscopy. Image cropping was performed to suppress noise, followed by image normalization to reduce variation in contrast/brightness. Using MATLABTM, a two-layer neural network with two class classifier was trained with these images to compute the weights of each layer and the performance was benchmarked against three performance indices. The results show that the present method was able to classify 1050 platelet images with 100% recognition rate for Class 1 (non-astigmatic) and 71.4% recognition rate for Class 2 (astigmatic). The trained neural network was then applied to a set of 9000 images. Finally, digital aberration correction by complex-amplitude correlation was successfully applied to correct for the astigmatism. Majmuah Enterprise 2019-08-14 E-Article PeerReviewed text en http://ir.unimas.my/id/eprint/28175/1/Classification%20of%20synthetic%20platelets%20in%20digital%20holographic%20microscopy%20by%20neural%20-%20Copy.pdf Khairul Fikri, Bin Tamrin and Rahmatullah, B. (2019) Classification of synthetic platelets in digital holographic microscopy by neural network. Borneo International Journal, 1 (3). pp. 19-34. ISSN 2636-9826 https://majmuah.com/journal/index.php/bij/article/view/32
institution Universiti Malaysia Sarawak
building Centre for Academic Information Services (CAIS)
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Malaysia Sarawak
content_source UNIMAS Institutional Repository
url_provider http://ir.unimas.my/
language English
topic QC Physics
spellingShingle QC Physics
Khairul Fikri, Bin Tamrin
Rahmatullah, B.
Classification of synthetic platelets in digital holographic microscopy by neural network
description Automatic classification of cell types and biological products are considered crucial in the field of hematology especially for early detection of diseases when the quantity that needs to be examined is considerably large. In a previous study, a cylindrical micro-channel was employed to mimic actual blood flow in the arteriole but it was found to cause astigmatism in the reconstructed holographic particle images. Additionally, correction of the images is important to avoid false disease detection. In this paper, we describe a new application of feed-forward backpropagation neural network for classifying images of astigmatic and non-astigmatic synthetic platelets that were obtained by digital holographic microscopy. Image cropping was performed to suppress noise, followed by image normalization to reduce variation in contrast/brightness. Using MATLABTM, a two-layer neural network with two class classifier was trained with these images to compute the weights of each layer and the performance was benchmarked against three performance indices. The results show that the present method was able to classify 1050 platelet images with 100% recognition rate for Class 1 (non-astigmatic) and 71.4% recognition rate for Class 2 (astigmatic). The trained neural network was then applied to a set of 9000 images. Finally, digital aberration correction by complex-amplitude correlation was successfully applied to correct for the astigmatism.
format E-Article
author Khairul Fikri, Bin Tamrin
Rahmatullah, B.
author_facet Khairul Fikri, Bin Tamrin
Rahmatullah, B.
author_sort Khairul Fikri, Bin Tamrin
title Classification of synthetic platelets in digital holographic microscopy by neural network
title_short Classification of synthetic platelets in digital holographic microscopy by neural network
title_full Classification of synthetic platelets in digital holographic microscopy by neural network
title_fullStr Classification of synthetic platelets in digital holographic microscopy by neural network
title_full_unstemmed Classification of synthetic platelets in digital holographic microscopy by neural network
title_sort classification of synthetic platelets in digital holographic microscopy by neural network
publisher Majmuah Enterprise
publishDate 2019
url http://ir.unimas.my/id/eprint/28175/1/Classification%20of%20synthetic%20platelets%20in%20digital%20holographic%20microscopy%20by%20neural%20-%20Copy.pdf
http://ir.unimas.my/id/eprint/28175/
https://majmuah.com/journal/index.php/bij/article/view/32
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