Genetic characterization of perna viridis L. in peninsular Malaysia using microsatellite markers.

A total of 19 polymorphic microsatellite loci were used to analyse levels of genetic variation for 10 populations of Perna viridis L. collected from all over peninsular Malaysia. The populations involved in this study included Pulau Aman in Penang, Tanjung Rhu in Kedah, Bagan Tiang in Perak, Pulau K...

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Main Authors: Ong, C.C., Yusoff, Khatijah, Yap, Chee Kong, Tan, Soon Guan
Format: Article
Language:English
Published: Indian Academy of Sciences 2009
Online Access:http://psasir.upm.edu.my/id/eprint/14875/
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Institution: Universiti Putra Malaysia
Language: English
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spelling my.upm.eprints.148752012-08-16T01:03:55Z http://psasir.upm.edu.my/id/eprint/14875/ Genetic characterization of perna viridis L. in peninsular Malaysia using microsatellite markers. Ong, C.C. Yusoff, Khatijah Yap, Chee Kong Tan, Soon Guan A total of 19 polymorphic microsatellite loci were used to analyse levels of genetic variation for 10 populations of Perna viridis L. collected from all over peninsular Malaysia. The populations involved in this study included Pulau Aman in Penang, Tanjung Rhu in Kedah, Bagan Tiang in Perak, Pulau Ketam in Selangor, Muar, Parit Jawa, Pantai Lido and Kampung Pasir Puteh in Johore, and Kuala Pontian and Nenasi in Pahang state. The number of alleles per locus ranged from two to seven, with an average of 3.1. Heterozygote deficiencies were observed across all the 10 populations. Characterization of the populations revealed that local populations of P. viridis in peninsular Malaysia were genetically similar enough to be used as a biomonitoring agent for heavy metal contamination in the Straits of Malacca. Cluster analysis grouped the P. viridis populations according to their geographical distributions with the exception of Parit Jawa. The analysis also revealed that P. viridis from the northern parts of peninsular Malaysia were found to be the most distant populations among the populations of mussels investigated and P. viridis from the eastern part of peninsular Malaysia were closer to the central and southern populations than to the northern populations. Indian Academy of Sciences 2009 Article PeerReviewed Ong, C.C. and Yusoff, Khatijah and Yap, Chee Kong and Tan, Soon Guan (2009) Genetic characterization of perna viridis L. in peninsular Malaysia using microsatellite markers. Journal of Genetics, 88 (2). pp. 153-163. ISSN 0022-1333 English
institution Universiti Putra Malaysia
building UPM Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Putra Malaysia
content_source UPM Institutional Repository
url_provider http://psasir.upm.edu.my/
language English
description A total of 19 polymorphic microsatellite loci were used to analyse levels of genetic variation for 10 populations of Perna viridis L. collected from all over peninsular Malaysia. The populations involved in this study included Pulau Aman in Penang, Tanjung Rhu in Kedah, Bagan Tiang in Perak, Pulau Ketam in Selangor, Muar, Parit Jawa, Pantai Lido and Kampung Pasir Puteh in Johore, and Kuala Pontian and Nenasi in Pahang state. The number of alleles per locus ranged from two to seven, with an average of 3.1. Heterozygote deficiencies were observed across all the 10 populations. Characterization of the populations revealed that local populations of P. viridis in peninsular Malaysia were genetically similar enough to be used as a biomonitoring agent for heavy metal contamination in the Straits of Malacca. Cluster analysis grouped the P. viridis populations according to their geographical distributions with the exception of Parit Jawa. The analysis also revealed that P. viridis from the northern parts of peninsular Malaysia were found to be the most distant populations among the populations of mussels investigated and P. viridis from the eastern part of peninsular Malaysia were closer to the central and southern populations than to the northern populations.
format Article
author Ong, C.C.
Yusoff, Khatijah
Yap, Chee Kong
Tan, Soon Guan
spellingShingle Ong, C.C.
Yusoff, Khatijah
Yap, Chee Kong
Tan, Soon Guan
Genetic characterization of perna viridis L. in peninsular Malaysia using microsatellite markers.
author_facet Ong, C.C.
Yusoff, Khatijah
Yap, Chee Kong
Tan, Soon Guan
author_sort Ong, C.C.
title Genetic characterization of perna viridis L. in peninsular Malaysia using microsatellite markers.
title_short Genetic characterization of perna viridis L. in peninsular Malaysia using microsatellite markers.
title_full Genetic characterization of perna viridis L. in peninsular Malaysia using microsatellite markers.
title_fullStr Genetic characterization of perna viridis L. in peninsular Malaysia using microsatellite markers.
title_full_unstemmed Genetic characterization of perna viridis L. in peninsular Malaysia using microsatellite markers.
title_sort genetic characterization of perna viridis l. in peninsular malaysia using microsatellite markers.
publisher Indian Academy of Sciences
publishDate 2009
url http://psasir.upm.edu.my/id/eprint/14875/
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