Variability of leaf morphology and marker genes of members of the halophila complex collected in Viet Nam

Seagrasses are marine angiosperms and adapted to aquatic life several times independently. In tropical as well as in temperate regions they play an important role in the coastal ecosystem. Classification according to morphology remains difficult due to very similar adaptations to the aquatic lifesty...

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Main Authors: Vy, Nguyen Xuan, Bujang, Japar Sidik, Papenbrocka, Jutta
Format: Article
Language:English
Published: Elsevier 2013
Online Access:http://psasir.upm.edu.my/id/eprint/30102/1/Variability%20of%20leaf%20morphology%20and%20marker%20genes%20of%20members%20of%20the%20halophila%20complex%20collected%20in%20Viet%20Nam.pdf
http://psasir.upm.edu.my/id/eprint/30102/
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Institution: Universiti Putra Malaysia
Language: English
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spelling my.upm.eprints.301022015-10-07T04:13:35Z http://psasir.upm.edu.my/id/eprint/30102/ Variability of leaf morphology and marker genes of members of the halophila complex collected in Viet Nam Vy, Nguyen Xuan Bujang, Japar Sidik Papenbrocka, Jutta Seagrasses are marine angiosperms and adapted to aquatic life several times independently. In tropical as well as in temperate regions they play an important role in the coastal ecosystem. Classification according to morphology remains difficult due to very similar adaptations to the aquatic lifestyle and small simple flowers which are often not even formed. Especially the Halophila genus (Hydrocharitaceae) forms a complex group with an unresolved taxonomy due to overlapping morphological characters and high plasticity leading to many misidentifications. Hence, this led to the hypothesis that phylogenetic analysis on the molecular level may resolve taxonomic classification. The aim of this study is to identify and unambiguously characterize Halophila species collected in Viet Nam using tree- and character-based analysis of rbcL and matK sequences. Results obtained from molecular data and leaf morphology indicate that there are at least three species found in Viet Nam. Topologies based on single locus or combined datasets were similar but not equal. Analysis of rbcL sequences showed lowest species resolution when only Halophila beccarii Aschers was resolved at the Halophila complex. matK shows better resolution with respect to H. beccarii and H. decipiens Ostenfeld. Combined rbcL and matK consensus trees showed the highest species resolution when all species form three distinct clades representative for three difference species including H. beccarii, H. decipiens, and H. ovalis (R. Br.) Hook. f. Elsevier 2013 Article PeerReviewed application/pdf en http://psasir.upm.edu.my/id/eprint/30102/1/Variability%20of%20leaf%20morphology%20and%20marker%20genes%20of%20members%20of%20the%20halophila%20complex%20collected%20in%20Viet%20Nam.pdf Vy, Nguyen Xuan and Bujang, Japar Sidik and Papenbrocka, Jutta (2013) Variability of leaf morphology and marker genes of members of the halophila complex collected in Viet Nam. Aquatic Botany, 110. pp. 6-15. ISSN 0304-3770 10.1016/j.aquabot.2013.04.003
institution Universiti Putra Malaysia
building UPM Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Putra Malaysia
content_source UPM Institutional Repository
url_provider http://psasir.upm.edu.my/
language English
description Seagrasses are marine angiosperms and adapted to aquatic life several times independently. In tropical as well as in temperate regions they play an important role in the coastal ecosystem. Classification according to morphology remains difficult due to very similar adaptations to the aquatic lifestyle and small simple flowers which are often not even formed. Especially the Halophila genus (Hydrocharitaceae) forms a complex group with an unresolved taxonomy due to overlapping morphological characters and high plasticity leading to many misidentifications. Hence, this led to the hypothesis that phylogenetic analysis on the molecular level may resolve taxonomic classification. The aim of this study is to identify and unambiguously characterize Halophila species collected in Viet Nam using tree- and character-based analysis of rbcL and matK sequences. Results obtained from molecular data and leaf morphology indicate that there are at least three species found in Viet Nam. Topologies based on single locus or combined datasets were similar but not equal. Analysis of rbcL sequences showed lowest species resolution when only Halophila beccarii Aschers was resolved at the Halophila complex. matK shows better resolution with respect to H. beccarii and H. decipiens Ostenfeld. Combined rbcL and matK consensus trees showed the highest species resolution when all species form three distinct clades representative for three difference species including H. beccarii, H. decipiens, and H. ovalis (R. Br.) Hook. f.
format Article
author Vy, Nguyen Xuan
Bujang, Japar Sidik
Papenbrocka, Jutta
spellingShingle Vy, Nguyen Xuan
Bujang, Japar Sidik
Papenbrocka, Jutta
Variability of leaf morphology and marker genes of members of the halophila complex collected in Viet Nam
author_facet Vy, Nguyen Xuan
Bujang, Japar Sidik
Papenbrocka, Jutta
author_sort Vy, Nguyen Xuan
title Variability of leaf morphology and marker genes of members of the halophila complex collected in Viet Nam
title_short Variability of leaf morphology and marker genes of members of the halophila complex collected in Viet Nam
title_full Variability of leaf morphology and marker genes of members of the halophila complex collected in Viet Nam
title_fullStr Variability of leaf morphology and marker genes of members of the halophila complex collected in Viet Nam
title_full_unstemmed Variability of leaf morphology and marker genes of members of the halophila complex collected in Viet Nam
title_sort variability of leaf morphology and marker genes of members of the halophila complex collected in viet nam
publisher Elsevier
publishDate 2013
url http://psasir.upm.edu.my/id/eprint/30102/1/Variability%20of%20leaf%20morphology%20and%20marker%20genes%20of%20members%20of%20the%20halophila%20complex%20collected%20in%20Viet%20Nam.pdf
http://psasir.upm.edu.my/id/eprint/30102/
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