Spectral features selection and classification of oil palm leaves infected by Basal stem rot (BSR) disease using dielectric spectroscopy

Basal stem rot (BSR) is a prominent plant disease caused by Ganoderma boninense fungus, which infects oil palm plantations leading to large economic losses in palm oil production. There is need for novel disease detection techniques that can be used to reduce the oil palm losses due to BSR. Thus, th...

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Main Authors: Al-Khaled, Alfadhl Yahya Khaled, Abd Aziz, Samsuzana, Bejo, Siti Khairunniza, Mat Nawi, Nazmi, Abu Seman, Idris
Format: Article
Language:English
Published: Elsevier 2018
Online Access:http://psasir.upm.edu.my/id/eprint/73946/1/Spectral%20features%20selection%20and%20classification%20of%20oil%20palm%20leaves%20infected%20by%20Basal%20stem%20rot%20%28BSR%29%20disease%20using%20dielectric%20spectroscopy.pdf
http://psasir.upm.edu.my/id/eprint/73946/
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Institution: Universiti Putra Malaysia
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spelling my.upm.eprints.739462020-04-29T17:31:23Z http://psasir.upm.edu.my/id/eprint/73946/ Spectral features selection and classification of oil palm leaves infected by Basal stem rot (BSR) disease using dielectric spectroscopy Al-Khaled, Alfadhl Yahya Khaled Abd Aziz, Samsuzana Bejo, Siti Khairunniza Mat Nawi, Nazmi Abu Seman, Idris Basal stem rot (BSR) is a prominent plant disease caused by Ganoderma boninense fungus, which infects oil palm plantations leading to large economic losses in palm oil production. There is need for novel disease detection techniques that can be used to reduce the oil palm losses due to BSR. Thus, this paper investigated the feasibility of utilizing electrical properties such as impedance, capacitance, dielectric constant, and dissipation factor in early detection of BSR disease in oil palm tree. Leaf samples from different oil palm trees (healthy, mild, moderate, and severely-infected) were collected and measured using a solid test fixture (16451B, Keysight Technologies, Japan) connected to an impedance analyzer (4294A, Agilent Technologies, Japan) at a frequency range of 100 kHz–30 MHz with 300 spectral interval. Genetic algorithm (GA), random forest (RF), and support vector machine-feature selection (SVM-FS) were used to analyze the electrical properties of the dataset and the most significant frequencies were selected. Following the selection of significant frequencies, the features were evaluated using two classifiers, support vector machine (SVM) and artificial neural networks (ANN) to determine the overall and individual class classification accuracies. The selection model comparative feature analysis demonstrated that the best statistical indicators with overall accuracy (88.64%), kappa (0.8480) and low mean absolute error (0.1652) were obtained using significant frequencies produced by SVM-FS model. The results indicated that the SVM classifier shows better performance as compared to ANN classifier. The results also showed that the classes, features selection models, and the electrical properties were found to be significantly different (p < .1). The impedance values were highly classified by Ganoderma disease at different levels of severity with overall accuracies of more than 80%. Impedance can be considered as the best electrical properties that can be used to estimate the severity of BSR disease in oil palm using spectroscopy technique. As such, this study demonstrates the potentials of utilizing electrical properties for detection of Ganoderma diseases in oil palm. Elsevier 2018 Article PeerReviewed text en http://psasir.upm.edu.my/id/eprint/73946/1/Spectral%20features%20selection%20and%20classification%20of%20oil%20palm%20leaves%20infected%20by%20Basal%20stem%20rot%20%28BSR%29%20disease%20using%20dielectric%20spectroscopy.pdf Al-Khaled, Alfadhl Yahya Khaled and Abd Aziz, Samsuzana and Bejo, Siti Khairunniza and Mat Nawi, Nazmi and Abu Seman, Idris (2018) Spectral features selection and classification of oil palm leaves infected by Basal stem rot (BSR) disease using dielectric spectroscopy. Computers and Electronics in Agriculture, 144. 297 - 309. ISSN 0168-1699; ESSN: 1872-7107 10.1016/j.compag.2017.11.012
institution Universiti Putra Malaysia
building UPM Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Putra Malaysia
content_source UPM Institutional Repository
url_provider http://psasir.upm.edu.my/
language English
description Basal stem rot (BSR) is a prominent plant disease caused by Ganoderma boninense fungus, which infects oil palm plantations leading to large economic losses in palm oil production. There is need for novel disease detection techniques that can be used to reduce the oil palm losses due to BSR. Thus, this paper investigated the feasibility of utilizing electrical properties such as impedance, capacitance, dielectric constant, and dissipation factor in early detection of BSR disease in oil palm tree. Leaf samples from different oil palm trees (healthy, mild, moderate, and severely-infected) were collected and measured using a solid test fixture (16451B, Keysight Technologies, Japan) connected to an impedance analyzer (4294A, Agilent Technologies, Japan) at a frequency range of 100 kHz–30 MHz with 300 spectral interval. Genetic algorithm (GA), random forest (RF), and support vector machine-feature selection (SVM-FS) were used to analyze the electrical properties of the dataset and the most significant frequencies were selected. Following the selection of significant frequencies, the features were evaluated using two classifiers, support vector machine (SVM) and artificial neural networks (ANN) to determine the overall and individual class classification accuracies. The selection model comparative feature analysis demonstrated that the best statistical indicators with overall accuracy (88.64%), kappa (0.8480) and low mean absolute error (0.1652) were obtained using significant frequencies produced by SVM-FS model. The results indicated that the SVM classifier shows better performance as compared to ANN classifier. The results also showed that the classes, features selection models, and the electrical properties were found to be significantly different (p < .1). The impedance values were highly classified by Ganoderma disease at different levels of severity with overall accuracies of more than 80%. Impedance can be considered as the best electrical properties that can be used to estimate the severity of BSR disease in oil palm using spectroscopy technique. As such, this study demonstrates the potentials of utilizing electrical properties for detection of Ganoderma diseases in oil palm.
format Article
author Al-Khaled, Alfadhl Yahya Khaled
Abd Aziz, Samsuzana
Bejo, Siti Khairunniza
Mat Nawi, Nazmi
Abu Seman, Idris
spellingShingle Al-Khaled, Alfadhl Yahya Khaled
Abd Aziz, Samsuzana
Bejo, Siti Khairunniza
Mat Nawi, Nazmi
Abu Seman, Idris
Spectral features selection and classification of oil palm leaves infected by Basal stem rot (BSR) disease using dielectric spectroscopy
author_facet Al-Khaled, Alfadhl Yahya Khaled
Abd Aziz, Samsuzana
Bejo, Siti Khairunniza
Mat Nawi, Nazmi
Abu Seman, Idris
author_sort Al-Khaled, Alfadhl Yahya Khaled
title Spectral features selection and classification of oil palm leaves infected by Basal stem rot (BSR) disease using dielectric spectroscopy
title_short Spectral features selection and classification of oil palm leaves infected by Basal stem rot (BSR) disease using dielectric spectroscopy
title_full Spectral features selection and classification of oil palm leaves infected by Basal stem rot (BSR) disease using dielectric spectroscopy
title_fullStr Spectral features selection and classification of oil palm leaves infected by Basal stem rot (BSR) disease using dielectric spectroscopy
title_full_unstemmed Spectral features selection and classification of oil palm leaves infected by Basal stem rot (BSR) disease using dielectric spectroscopy
title_sort spectral features selection and classification of oil palm leaves infected by basal stem rot (bsr) disease using dielectric spectroscopy
publisher Elsevier
publishDate 2018
url http://psasir.upm.edu.my/id/eprint/73946/1/Spectral%20features%20selection%20and%20classification%20of%20oil%20palm%20leaves%20infected%20by%20Basal%20stem%20rot%20%28BSR%29%20disease%20using%20dielectric%20spectroscopy.pdf
http://psasir.upm.edu.my/id/eprint/73946/
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