Copper-peptides mimicking catalytic activity of laccase in oxidation reactions

Laccase, an oxidative enzyme naturally found in fungi and bacteria, has been widely used in the fields of chemical and bio-catalysis. Its active site contains several copper ions making it very interesting for studies related to the structure and catalytic mechanisms. However, extracting laccase...

Full description

Saved in:
Bibliographic Details
Main Author: Begum, Sharifa Zaithun
Format: Thesis
Language:English
Published: 2020
Subjects:
Online Access:http://psasir.upm.edu.my/id/eprint/90718/1/FS%202020%2029%20IR.pdf
http://psasir.upm.edu.my/id/eprint/90718/
Tags: Add Tag
No Tags, Be the first to tag this record!
Institution: Universiti Putra Malaysia
Language: English
id my.upm.eprints.90718
record_format eprints
spelling my.upm.eprints.907182021-09-08T00:35:31Z http://psasir.upm.edu.my/id/eprint/90718/ Copper-peptides mimicking catalytic activity of laccase in oxidation reactions Begum, Sharifa Zaithun Laccase, an oxidative enzyme naturally found in fungi and bacteria, has been widely used in the fields of chemical and bio-catalysis. Its active site contains several copper ions making it very interesting for studies related to the structure and catalytic mechanisms. However, extracting laccase uses large amounts of organic solvents to attain low yield; making it a less preferred choice for all green chemistry applications. The significance of this study is to mimic and enhance the catalytic activity of the highest oxidation activity reported laccase from Trametes versicolor. The four peptide sequences of the active sites found in most laccases was designed into nona (Np), hepta (Hp), tetrapeptides (Tp1 and Tp2) using computational techniques. The peptides were synthesized using Fmoc SPPS, analyzed and purified using HPLC and LC-MS. Copper(II)-peptides identified as Np-CuC, Np-CuS, Np-CuN, Hp-CuC, Hp-CuS, Hp- CuN, Tp1-CuC, Tp1-CuS, Tp2-CuC and Tp2-CuS were synthesized, crystallized and analyzed using FTIR, Raman, NMR, AAS, XPS and CD. Different molar ratio of peptides to copper(II) ions were analyzed for binding studies. These peptides and copper-peptides were tested for their catalytic activity in oxidation reaction of benzyl alcohol where both oxidation to benzaldehyde and disproportionation to toluene and phenol were achieved simulataneously. Np-CuC was observed to have higher catalytic activity (62.3%, 100% selectivity) than laccase (40.8%, 19.1% selectivity) towards benzaldehyde. They were also used as catalysts in the degradation of twelve pharmaceutical active compounds (PhACs). Tp2-CuS (1:2) proved to be a better catalyst in the degradation of PhACs. Oxidation of 5-ASA and DCA catalyzed by these copper peptides where Hp-CuS provided the highest yield of the oxidized product (46.5%). These activities were compared with laccase (positive control) and no catalyst (negative control). Overall, Np-CuC, Tp2-CuS and Hp-CuS were found to be better catalysts for oxidation reactions compared to their parent peptides and laccase. 2020-07 Thesis NonPeerReviewed text en http://psasir.upm.edu.my/id/eprint/90718/1/FS%202020%2029%20IR.pdf Begum, Sharifa Zaithun (2020) Copper-peptides mimicking catalytic activity of laccase in oxidation reactions. Doctoral thesis, Universiti Putra Malaysia. Laccase Peptides - Synthesis Oxidation-reduction reaction
institution Universiti Putra Malaysia
building UPM Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Putra Malaysia
content_source UPM Institutional Repository
url_provider http://psasir.upm.edu.my/
language English
topic Laccase
Peptides - Synthesis
Oxidation-reduction reaction
spellingShingle Laccase
Peptides - Synthesis
Oxidation-reduction reaction
Begum, Sharifa Zaithun
Copper-peptides mimicking catalytic activity of laccase in oxidation reactions
description Laccase, an oxidative enzyme naturally found in fungi and bacteria, has been widely used in the fields of chemical and bio-catalysis. Its active site contains several copper ions making it very interesting for studies related to the structure and catalytic mechanisms. However, extracting laccase uses large amounts of organic solvents to attain low yield; making it a less preferred choice for all green chemistry applications. The significance of this study is to mimic and enhance the catalytic activity of the highest oxidation activity reported laccase from Trametes versicolor. The four peptide sequences of the active sites found in most laccases was designed into nona (Np), hepta (Hp), tetrapeptides (Tp1 and Tp2) using computational techniques. The peptides were synthesized using Fmoc SPPS, analyzed and purified using HPLC and LC-MS. Copper(II)-peptides identified as Np-CuC, Np-CuS, Np-CuN, Hp-CuC, Hp-CuS, Hp- CuN, Tp1-CuC, Tp1-CuS, Tp2-CuC and Tp2-CuS were synthesized, crystallized and analyzed using FTIR, Raman, NMR, AAS, XPS and CD. Different molar ratio of peptides to copper(II) ions were analyzed for binding studies. These peptides and copper-peptides were tested for their catalytic activity in oxidation reaction of benzyl alcohol where both oxidation to benzaldehyde and disproportionation to toluene and phenol were achieved simulataneously. Np-CuC was observed to have higher catalytic activity (62.3%, 100% selectivity) than laccase (40.8%, 19.1% selectivity) towards benzaldehyde. They were also used as catalysts in the degradation of twelve pharmaceutical active compounds (PhACs). Tp2-CuS (1:2) proved to be a better catalyst in the degradation of PhACs. Oxidation of 5-ASA and DCA catalyzed by these copper peptides where Hp-CuS provided the highest yield of the oxidized product (46.5%). These activities were compared with laccase (positive control) and no catalyst (negative control). Overall, Np-CuC, Tp2-CuS and Hp-CuS were found to be better catalysts for oxidation reactions compared to their parent peptides and laccase.
format Thesis
author Begum, Sharifa Zaithun
author_facet Begum, Sharifa Zaithun
author_sort Begum, Sharifa Zaithun
title Copper-peptides mimicking catalytic activity of laccase in oxidation reactions
title_short Copper-peptides mimicking catalytic activity of laccase in oxidation reactions
title_full Copper-peptides mimicking catalytic activity of laccase in oxidation reactions
title_fullStr Copper-peptides mimicking catalytic activity of laccase in oxidation reactions
title_full_unstemmed Copper-peptides mimicking catalytic activity of laccase in oxidation reactions
title_sort copper-peptides mimicking catalytic activity of laccase in oxidation reactions
publishDate 2020
url http://psasir.upm.edu.my/id/eprint/90718/1/FS%202020%2029%20IR.pdf
http://psasir.upm.edu.my/id/eprint/90718/
_version_ 1710677231797272576