Machine-learning approach using SAR data for the classification of oil palm trees that are non-infected and infected with the basal stem rot disease

• Main Authors: Che Hashim, Izrahayu, Mohamed Shariff, Abdul Rashid, Bejo, Siti Khairunniza, Muharam, Farrah Melissa, Ahmad, Khairulmazmi
• Format: Article
• Published: MDPI AG 2021
• Online Access: http://psasir.upm.edu.my/id/eprint/94065/; https://www.mdpi.com/2073-4395/11/3/532
• Institution: Universiti Putra Malaysia

Basal stem rot disease (BSR) in oil palm plants is caused by the Ganoderma boninense (G. boninense) fungus. BSR is a major disease that affects oil palm plantations in Malaysia and Indonesia. As of now, the only available sustaining measure is to prolong the life of oil palm trees since there has been no effective treatment for the BSR disease. This project used an ALOS PALSAR-2 image with dual polarization, Horizontal transmit and Horizontal receive (HH) and Horizontal transmit and Vertical receive (HV). The aims of this study were to (1) identify the potential backscatter variables; and (2) examine the performance of machine learning (ML) classifiers (Multilayer Perceptron (MLP) and Random Forest (RF) to classify oil palm trees that are non-infected and infected by G. boninense. The sample size consisted of 55 uninfected trees and 37 infected trees. We used the imbalance data approach (Synthetic Minority Over-Sampling Technique (SMOTE) in these classifications due to the differing sample sizes. The result showed backscatter variable HV had a higher correct classification for the G. boninense non-infected and infected oil palm trees for both classifiers; the MLP classifier model had a robust success rate, which correctly classified 100% for non-infected and 91.30% for infected G. boninense, and RF had a robust success rate, which correctly classified 94.11% for non-infected and 91.30% for infected G. boninense. In terms of model performance using the most significant variables, HV, the MLP model had a balanced accuracy (BCR) of 95.65% compared to 92.70% for the RF model. Comparison between the MLP model and RF model for the receiver operating characteristics (ROC) curve region, (AUC) gave a value of 0.92 and 0.95, respectively, for the MLP and RF models. Therefore, it can be concluded by using only the HV polarization, that both the MLP and RF can be used to predict BSR disease with a relatively high accuracy.