Comparative proteomic analysis of oil palm (Elaeis guineensis Jacq.) during early fruit development

To gain insights on protein changes in fruit setting and growth in oil palm, a comparative proteomic approach was undertaken to study proteome changes during its early development. The variations in the proteome at five early developmental stages were investigated via a gel-based proteomic technique...

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Main Authors: Kok, Sau Yee, Namasivayam, Parameswari, Ee, Gwendoline Cheng Lian, Ong Abdullah, Meilina
Format: Article
Published: Elsevier 2021
Online Access:http://psasir.upm.edu.my/id/eprint/96455/
https://www.sciencedirect.com/science/article/pii/S1874391920304206
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Institution: Universiti Putra Malaysia
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spelling my.upm.eprints.964552023-01-11T09:02:18Z http://psasir.upm.edu.my/id/eprint/96455/ Comparative proteomic analysis of oil palm (Elaeis guineensis Jacq.) during early fruit development Kok, Sau Yee Namasivayam, Parameswari Ee, Gwendoline Cheng Lian Ong Abdullah, Meilina To gain insights on protein changes in fruit setting and growth in oil palm, a comparative proteomic approach was undertaken to study proteome changes during its early development. The variations in the proteome at five early developmental stages were investigated via a gel-based proteomic technique. A total of 129 variant proteins were determined using mass spectrometric analysis, resulting in 80 identifications. The majority of the identified protein species were classified as energy and metabolism, stress response/defence and cell structure during early oil palm development representing potential candidates for the control of final fruit size and composition. Seven prominent protein species were then characterised using real-time polymerase chain reaction to validate the mRNA expression against the protein abundant profiles. Transcript and protein profiles were parallel across the developmental stages, but divergent expression was observed in one protein spot, indicative of possible post-transcriptional events. Our results revealed protein changes in early oil palm fruit development provide valuable information in the understanding of fruit growth and metabolism during early stages that may contribute towards improving agronomic traits. Elsevier 2021 Article PeerReviewed Kok, Sau Yee and Namasivayam, Parameswari and Ee, Gwendoline Cheng Lian and Ong Abdullah, Meilina (2021) Comparative proteomic analysis of oil palm (Elaeis guineensis Jacq.) during early fruit development. Journal of Proteomics, 232. art. no. 104052. pp. 1-13. ISSN 1874-3919 https://www.sciencedirect.com/science/article/pii/S1874391920304206 10.1016/j.jprot.2020.104052
institution Universiti Putra Malaysia
building UPM Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Putra Malaysia
content_source UPM Institutional Repository
url_provider http://psasir.upm.edu.my/
description To gain insights on protein changes in fruit setting and growth in oil palm, a comparative proteomic approach was undertaken to study proteome changes during its early development. The variations in the proteome at five early developmental stages were investigated via a gel-based proteomic technique. A total of 129 variant proteins were determined using mass spectrometric analysis, resulting in 80 identifications. The majority of the identified protein species were classified as energy and metabolism, stress response/defence and cell structure during early oil palm development representing potential candidates for the control of final fruit size and composition. Seven prominent protein species were then characterised using real-time polymerase chain reaction to validate the mRNA expression against the protein abundant profiles. Transcript and protein profiles were parallel across the developmental stages, but divergent expression was observed in one protein spot, indicative of possible post-transcriptional events. Our results revealed protein changes in early oil palm fruit development provide valuable information in the understanding of fruit growth and metabolism during early stages that may contribute towards improving agronomic traits.
format Article
author Kok, Sau Yee
Namasivayam, Parameswari
Ee, Gwendoline Cheng Lian
Ong Abdullah, Meilina
spellingShingle Kok, Sau Yee
Namasivayam, Parameswari
Ee, Gwendoline Cheng Lian
Ong Abdullah, Meilina
Comparative proteomic analysis of oil palm (Elaeis guineensis Jacq.) during early fruit development
author_facet Kok, Sau Yee
Namasivayam, Parameswari
Ee, Gwendoline Cheng Lian
Ong Abdullah, Meilina
author_sort Kok, Sau Yee
title Comparative proteomic analysis of oil palm (Elaeis guineensis Jacq.) during early fruit development
title_short Comparative proteomic analysis of oil palm (Elaeis guineensis Jacq.) during early fruit development
title_full Comparative proteomic analysis of oil palm (Elaeis guineensis Jacq.) during early fruit development
title_fullStr Comparative proteomic analysis of oil palm (Elaeis guineensis Jacq.) during early fruit development
title_full_unstemmed Comparative proteomic analysis of oil palm (Elaeis guineensis Jacq.) during early fruit development
title_sort comparative proteomic analysis of oil palm (elaeis guineensis jacq.) during early fruit development
publisher Elsevier
publishDate 2021
url http://psasir.upm.edu.my/id/eprint/96455/
https://www.sciencedirect.com/science/article/pii/S1874391920304206
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