Morphology and molecular phylogeny of the marine diatom Nitzschia dentatum sp. nov. and N. Johorensis sp. nov. (Bacillariophyceae) from Malaysia
The marine diatom Nitzschia dentatum sp. nov. isolated from seawater samples of Kudat and N. johorensis sp. nov. isolated from beach sand samples of Sibu Island, Malaysia, have been described in this paper. Morphological identification, molecular phylogeny and toxin analyses were executed on the pur...
Saved in:
Main Authors: | , |
---|---|
Format: | Article |
Language: | English |
Published: |
Bangladesh Association of Plant Taxonomists (BAPT)
2017
|
Subjects: | |
Online Access: | http://eprints.utm.my/id/eprint/75424/1/SNPSuriyanti_MorphologyandMolecularPhylogenyoftheMarine.pdf http://eprints.utm.my/id/eprint/75424/ https://www.scopus.com/inward/record.uri?eid=2-s2.0-85039865819&doi=10.3329%2fbjpt.v24i2.35114&partnerID=40&md5=2cdc5dd979cce41e39b274027e6eb319 |
Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
Institution: | Universiti Teknologi Malaysia |
Language: | English |
id |
my.utm.75424 |
---|---|
record_format |
eprints |
spelling |
my.utm.754242018-03-22T11:08:55Z http://eprints.utm.my/id/eprint/75424/ Morphology and molecular phylogeny of the marine diatom Nitzschia dentatum sp. nov. and N. Johorensis sp. nov. (Bacillariophyceae) from Malaysia Suriyanti, S. N. P. Usup, G. T Technology (General) The marine diatom Nitzschia dentatum sp. nov. isolated from seawater samples of Kudat and N. johorensis sp. nov. isolated from beach sand samples of Sibu Island, Malaysia, have been described in this paper. Morphological identification, molecular phylogeny and toxin analyses were executed on the pure non-axenic algal cultures designated as KD89 and PS8, respectively. The main distinguishing feature of N. dentatum sp. nov. compared to other species is the jaggedcingulum structure which is only unique to this species. Meanwhile, N. johorensis sp. nov.is strongly characterized by the 'hantzschioid'and 'nitzschioid' symmetry dimorphisms; a common diagnostic feature but rarely described in other Nitzschia species. Identification of both strains was made based on the frustule diagnostic features and verified using the partial large ribosomal subunit DNA sequences. The results have confirmed that these two speciesare independent entities and novel species that have not been documented elsewhere. A notable finding from the Maximum Likelihood (ML), Maximum Parsimony (MP) and Bayesian Index (BI) analyses have also revealed that Nitzschia species that have indentation in the middle of valves have been consistently grouped as same clade with high bootstrap values. The extracts of both species did not show detectable amount of domoicacid and have therefore, been classified as non-toxic. This discovery contributes to the documentation of Nitzschia species worldwide. Bangladesh Association of Plant Taxonomists (BAPT) 2017 Article PeerReviewed application/pdf en http://eprints.utm.my/id/eprint/75424/1/SNPSuriyanti_MorphologyandMolecularPhylogenyoftheMarine.pdf Suriyanti, S. N. P. and Usup, G. (2017) Morphology and molecular phylogeny of the marine diatom Nitzschia dentatum sp. nov. and N. Johorensis sp. nov. (Bacillariophyceae) from Malaysia. Bangladesh Journal of Plant Taxonomy, 24 (2). pp. 183-196. ISSN 1028-2092 https://www.scopus.com/inward/record.uri?eid=2-s2.0-85039865819&doi=10.3329%2fbjpt.v24i2.35114&partnerID=40&md5=2cdc5dd979cce41e39b274027e6eb319 |
institution |
Universiti Teknologi Malaysia |
building |
UTM Library |
collection |
Institutional Repository |
continent |
Asia |
country |
Malaysia |
content_provider |
Universiti Teknologi Malaysia |
content_source |
UTM Institutional Repository |
url_provider |
http://eprints.utm.my/ |
language |
English |
topic |
T Technology (General) |
spellingShingle |
T Technology (General) Suriyanti, S. N. P. Usup, G. Morphology and molecular phylogeny of the marine diatom Nitzschia dentatum sp. nov. and N. Johorensis sp. nov. (Bacillariophyceae) from Malaysia |
description |
The marine diatom Nitzschia dentatum sp. nov. isolated from seawater samples of Kudat and N. johorensis sp. nov. isolated from beach sand samples of Sibu Island, Malaysia, have been described in this paper. Morphological identification, molecular phylogeny and toxin analyses were executed on the pure non-axenic algal cultures designated as KD89 and PS8, respectively. The main distinguishing feature of N. dentatum sp. nov. compared to other species is the jaggedcingulum structure which is only unique to this species. Meanwhile, N. johorensis sp. nov.is strongly characterized by the 'hantzschioid'and 'nitzschioid' symmetry dimorphisms; a common diagnostic feature but rarely described in other Nitzschia species. Identification of both strains was made based on the frustule diagnostic features and verified using the partial large ribosomal subunit DNA sequences. The results have confirmed that these two speciesare independent entities and novel species that have not been documented elsewhere. A notable finding from the Maximum Likelihood (ML), Maximum Parsimony (MP) and Bayesian Index (BI) analyses have also revealed that Nitzschia species that have indentation in the middle of valves have been consistently grouped as same clade with high bootstrap values. The extracts of both species did not show detectable amount of domoicacid and have therefore, been classified as non-toxic. This discovery contributes to the documentation of Nitzschia species worldwide. |
format |
Article |
author |
Suriyanti, S. N. P. Usup, G. |
author_facet |
Suriyanti, S. N. P. Usup, G. |
author_sort |
Suriyanti, S. N. P. |
title |
Morphology and molecular phylogeny of the marine diatom Nitzschia dentatum sp. nov. and N. Johorensis sp. nov. (Bacillariophyceae) from Malaysia |
title_short |
Morphology and molecular phylogeny of the marine diatom Nitzschia dentatum sp. nov. and N. Johorensis sp. nov. (Bacillariophyceae) from Malaysia |
title_full |
Morphology and molecular phylogeny of the marine diatom Nitzschia dentatum sp. nov. and N. Johorensis sp. nov. (Bacillariophyceae) from Malaysia |
title_fullStr |
Morphology and molecular phylogeny of the marine diatom Nitzschia dentatum sp. nov. and N. Johorensis sp. nov. (Bacillariophyceae) from Malaysia |
title_full_unstemmed |
Morphology and molecular phylogeny of the marine diatom Nitzschia dentatum sp. nov. and N. Johorensis sp. nov. (Bacillariophyceae) from Malaysia |
title_sort |
morphology and molecular phylogeny of the marine diatom nitzschia dentatum sp. nov. and n. johorensis sp. nov. (bacillariophyceae) from malaysia |
publisher |
Bangladesh Association of Plant Taxonomists (BAPT) |
publishDate |
2017 |
url |
http://eprints.utm.my/id/eprint/75424/1/SNPSuriyanti_MorphologyandMolecularPhylogenyoftheMarine.pdf http://eprints.utm.my/id/eprint/75424/ https://www.scopus.com/inward/record.uri?eid=2-s2.0-85039865819&doi=10.3329%2fbjpt.v24i2.35114&partnerID=40&md5=2cdc5dd979cce41e39b274027e6eb319 |
_version_ |
1643657060244520960 |