Automated masks generation for coffee and apple leaf infected with single or multiple diseases-based color analysis approaches

Identification of plant disease is affected by many factors. The scarcity of rare or mild symptoms, the sensitivity of segmentation is influenced by light and shadow of images capturing conditions, and symptoms characteristics are represented by multiple lesions of varied colours on the same leaf at...

Full description

Saved in:
Bibliographic Details
Main Authors: Hasan, Reem Ibrahim, Mohd. Yusuf, Suhaila, Mohd. Rahim, Mohd. Shafry, Alzubaidi, Laith
Format: Article
Language:English
Published: Elsevier Ltd. 2022
Subjects:
Online Access:http://eprints.utm.my/id/eprint/98665/1/ReenIbrahimHasan2022_AutomatedMasksGenerationforCoffee.pdf
http://eprints.utm.my/id/eprint/98665/
http://dx.doi.org/10.1016/j.imu.2021.100837
Tags: Add Tag
No Tags, Be the first to tag this record!
Institution: Universiti Teknologi Malaysia
Language: English
id my.utm.98665
record_format eprints
spelling my.utm.986652023-01-30T04:36:28Z http://eprints.utm.my/id/eprint/98665/ Automated masks generation for coffee and apple leaf infected with single or multiple diseases-based color analysis approaches Hasan, Reem Ibrahim Mohd. Yusuf, Suhaila Mohd. Rahim, Mohd. Shafry Alzubaidi, Laith QA75 Electronic computers. Computer science Identification of plant disease is affected by many factors. The scarcity of rare or mild symptoms, the sensitivity of segmentation is influenced by light and shadow of images capturing conditions, and symptoms characteristics are represented by multiple lesions of varied colours on the same leaf at different stages of infection. Traditional approaches face several problems: contrast handling leads to mild symptoms being undetected and deals with edges results in curved surfaces and veins being considered new regions of interest. Thresholding of segmentation restricts it to a specific range of values, which prevents it from dealing with an entire area (healthy, injured, or noise). Deep learning approaches also face problems of dealing with imbalanced datasets. The existence of overlapped symptoms on the same leaf sample is rare. Most deep models detect a single type of lesion at a single time. Masks with a single type of infection are used for training these models that lead to misclassification. Manual annotation of symptoms is considered time-consuming. Therefore, the proposed framework in this study is an attempt to overcome certain drawbacks of traditional segmentation approaches to generate masks for deep disease classification models. The main objective is to label datasets based on a semi-automated segmentation of leaves and disordered regions. There is no need to manage contrast or apply filters that keep lesion characteristics unchanged. As a result, every pixel in the predetermined lesions is selected accurately. The approach is applied to three different datasets with single and multiple infections. The obtained overall precision is 90%. The average intersection over the union of the injured regions is 0.83. The brown and the dark brown lesions are more accurately segmented than the yellow lesions. Elsevier Ltd. 2022 Article PeerReviewed application/pdf en http://eprints.utm.my/id/eprint/98665/1/ReenIbrahimHasan2022_AutomatedMasksGenerationforCoffee.pdf Hasan, Reem Ibrahim and Mohd. Yusuf, Suhaila and Mohd. Rahim, Mohd. Shafry and Alzubaidi, Laith (2022) Automated masks generation for coffee and apple leaf infected with single or multiple diseases-based color analysis approaches. Informatics in Medicine Unlocked, 28 . pp. 1-8. ISSN 2352-9148 http://dx.doi.org/10.1016/j.imu.2021.100837 DOI: 10.1016/j.imu.2021.100837
institution Universiti Teknologi Malaysia
building UTM Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Teknologi Malaysia
content_source UTM Institutional Repository
url_provider http://eprints.utm.my/
language English
topic QA75 Electronic computers. Computer science
spellingShingle QA75 Electronic computers. Computer science
Hasan, Reem Ibrahim
Mohd. Yusuf, Suhaila
Mohd. Rahim, Mohd. Shafry
Alzubaidi, Laith
Automated masks generation for coffee and apple leaf infected with single or multiple diseases-based color analysis approaches
description Identification of plant disease is affected by many factors. The scarcity of rare or mild symptoms, the sensitivity of segmentation is influenced by light and shadow of images capturing conditions, and symptoms characteristics are represented by multiple lesions of varied colours on the same leaf at different stages of infection. Traditional approaches face several problems: contrast handling leads to mild symptoms being undetected and deals with edges results in curved surfaces and veins being considered new regions of interest. Thresholding of segmentation restricts it to a specific range of values, which prevents it from dealing with an entire area (healthy, injured, or noise). Deep learning approaches also face problems of dealing with imbalanced datasets. The existence of overlapped symptoms on the same leaf sample is rare. Most deep models detect a single type of lesion at a single time. Masks with a single type of infection are used for training these models that lead to misclassification. Manual annotation of symptoms is considered time-consuming. Therefore, the proposed framework in this study is an attempt to overcome certain drawbacks of traditional segmentation approaches to generate masks for deep disease classification models. The main objective is to label datasets based on a semi-automated segmentation of leaves and disordered regions. There is no need to manage contrast or apply filters that keep lesion characteristics unchanged. As a result, every pixel in the predetermined lesions is selected accurately. The approach is applied to three different datasets with single and multiple infections. The obtained overall precision is 90%. The average intersection over the union of the injured regions is 0.83. The brown and the dark brown lesions are more accurately segmented than the yellow lesions.
format Article
author Hasan, Reem Ibrahim
Mohd. Yusuf, Suhaila
Mohd. Rahim, Mohd. Shafry
Alzubaidi, Laith
author_facet Hasan, Reem Ibrahim
Mohd. Yusuf, Suhaila
Mohd. Rahim, Mohd. Shafry
Alzubaidi, Laith
author_sort Hasan, Reem Ibrahim
title Automated masks generation for coffee and apple leaf infected with single or multiple diseases-based color analysis approaches
title_short Automated masks generation for coffee and apple leaf infected with single or multiple diseases-based color analysis approaches
title_full Automated masks generation for coffee and apple leaf infected with single or multiple diseases-based color analysis approaches
title_fullStr Automated masks generation for coffee and apple leaf infected with single or multiple diseases-based color analysis approaches
title_full_unstemmed Automated masks generation for coffee and apple leaf infected with single or multiple diseases-based color analysis approaches
title_sort automated masks generation for coffee and apple leaf infected with single or multiple diseases-based color analysis approaches
publisher Elsevier Ltd.
publishDate 2022
url http://eprints.utm.my/id/eprint/98665/1/ReenIbrahimHasan2022_AutomatedMasksGenerationforCoffee.pdf
http://eprints.utm.my/id/eprint/98665/
http://dx.doi.org/10.1016/j.imu.2021.100837
_version_ 1756684240818274304