DNA barcoding and molecular phylogeny of the Philippine Mycetia reinw. (Rubiaceae) including an account of a new species from Agusan del Norte, Mycetia dagohoyi

The Philippines has four species of Myctia Reinw. (Rubiaceae), M. cauliflora, M. javanica, M. mindanaensis and M. apoensis with the later two recognized as endemics and new combinations from Adenosacme Wall. Currently, the taxonomy and phylogeny of the Myctia are imperfectly known. Several specimens...

Full description

Saved in:
Bibliographic Details
Main Authors: De la Bajan, Ulpiano P., Jr., Ordas, Jorge Anton D., Tandang, Danilo N., Alejandro, Grecebio Jonathan D.
Format: text
Published: Animo Repository 2016
Subjects:
Online Access:https://animorepository.dlsu.edu.ph/faculty_research/11188
Tags: Add Tag
No Tags, Be the first to tag this record!
Institution: De La Salle University
id oai:animorepository.dlsu.edu.ph:faculty_research-11598
record_format eprints
spelling oai:animorepository.dlsu.edu.ph:faculty_research-115982023-10-28T01:18:07Z DNA barcoding and molecular phylogeny of the Philippine Mycetia reinw. (Rubiaceae) including an account of a new species from Agusan del Norte, Mycetia dagohoyi De la Bajan, Ulpiano P., Jr. Ordas, Jorge Anton D. Tandang, Danilo N. Alejandro, Grecebio Jonathan D. The Philippines has four species of Myctia Reinw. (Rubiaceae), M. cauliflora, M. javanica, M. mindanaensis and M. apoensis with the later two recognized as endemics and new combinations from Adenosacme Wall. Currently, the taxonomy and phylogeny of the Myctia are imperfectly known. Several specimens were collected from Negros Oriental, Camarines Sur, Batanes, Agusan del Norte, Surigao, Camiguin and Davao. These were subjected to morphological and molecular assessments using six DNA markers: rps16, trnL-F, ITS, matK, rbcL and trnH-psbA. Bayesian analyses showed that M. cauliflora and M. apoensis are sister-taxa while M. mindanaensis belongs to a separate clade from M. javanica. Morphological data showed that they are distinct from each other. Interestingly, a species from Agusan del Norte differs in morphology and showed divergence with a high support and is hereby proposed as a new species, Myctia dagohoyi. In addition, the performance of the markers was assessed in terms of universality and discriminatory power through a DNA barcoding analyses. Based from the results, the combined rps16, trnL-F and trnH-psbA is the best barcode set to study the genus Mycetia. 2016-05-01T07:00:00Z text https://animorepository.dlsu.edu.ph/faculty_research/11188 Faculty Research Work Animo Repository Rubiaceae—Variation—Philippines Biology
institution De La Salle University
building De La Salle University Library
continent Asia
country Philippines
Philippines
content_provider De La Salle University Library
collection DLSU Institutional Repository
topic Rubiaceae—Variation—Philippines
Biology
spellingShingle Rubiaceae—Variation—Philippines
Biology
De la Bajan, Ulpiano P., Jr.
Ordas, Jorge Anton D.
Tandang, Danilo N.
Alejandro, Grecebio Jonathan D.
DNA barcoding and molecular phylogeny of the Philippine Mycetia reinw. (Rubiaceae) including an account of a new species from Agusan del Norte, Mycetia dagohoyi
description The Philippines has four species of Myctia Reinw. (Rubiaceae), M. cauliflora, M. javanica, M. mindanaensis and M. apoensis with the later two recognized as endemics and new combinations from Adenosacme Wall. Currently, the taxonomy and phylogeny of the Myctia are imperfectly known. Several specimens were collected from Negros Oriental, Camarines Sur, Batanes, Agusan del Norte, Surigao, Camiguin and Davao. These were subjected to morphological and molecular assessments using six DNA markers: rps16, trnL-F, ITS, matK, rbcL and trnH-psbA. Bayesian analyses showed that M. cauliflora and M. apoensis are sister-taxa while M. mindanaensis belongs to a separate clade from M. javanica. Morphological data showed that they are distinct from each other. Interestingly, a species from Agusan del Norte differs in morphology and showed divergence with a high support and is hereby proposed as a new species, Myctia dagohoyi. In addition, the performance of the markers was assessed in terms of universality and discriminatory power through a DNA barcoding analyses. Based from the results, the combined rps16, trnL-F and trnH-psbA is the best barcode set to study the genus Mycetia.
format text
author De la Bajan, Ulpiano P., Jr.
Ordas, Jorge Anton D.
Tandang, Danilo N.
Alejandro, Grecebio Jonathan D.
author_facet De la Bajan, Ulpiano P., Jr.
Ordas, Jorge Anton D.
Tandang, Danilo N.
Alejandro, Grecebio Jonathan D.
author_sort De la Bajan, Ulpiano P., Jr.
title DNA barcoding and molecular phylogeny of the Philippine Mycetia reinw. (Rubiaceae) including an account of a new species from Agusan del Norte, Mycetia dagohoyi
title_short DNA barcoding and molecular phylogeny of the Philippine Mycetia reinw. (Rubiaceae) including an account of a new species from Agusan del Norte, Mycetia dagohoyi
title_full DNA barcoding and molecular phylogeny of the Philippine Mycetia reinw. (Rubiaceae) including an account of a new species from Agusan del Norte, Mycetia dagohoyi
title_fullStr DNA barcoding and molecular phylogeny of the Philippine Mycetia reinw. (Rubiaceae) including an account of a new species from Agusan del Norte, Mycetia dagohoyi
title_full_unstemmed DNA barcoding and molecular phylogeny of the Philippine Mycetia reinw. (Rubiaceae) including an account of a new species from Agusan del Norte, Mycetia dagohoyi
title_sort dna barcoding and molecular phylogeny of the philippine mycetia reinw. (rubiaceae) including an account of a new species from agusan del norte, mycetia dagohoyi
publisher Animo Repository
publishDate 2016
url https://animorepository.dlsu.edu.ph/faculty_research/11188
_version_ 1781418223714959360