Effects of salinity on the CO2 permeation across lipid bilayer for microalgae biofixation: A molecular dynamics study

The continuous threat of increasing CO2 concentration in the atmosphere has altered the carbon balance of our planet causing global climate change. Biological fixation of atmospheric CO2 by unicellular microorganisms such as microalgae is a promising technology pursued extensively by researchers as...

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Main Authors: Manrique, Robby, Moreno, Joaquin Lorenzo, Villagracia, Al Rey C., Ubando, Aristotle T., Kasai, Hideaki, Arboleda, Nelson B., Jr., David, Melanie Y., Culaba, Alvin B.
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Published: Animo Repository 2018
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Online Access:https://animorepository.dlsu.edu.ph/faculty_research/2265
https://animorepository.dlsu.edu.ph/context/faculty_research/article/3264/type/native/viewcontent
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spelling oai:animorepository.dlsu.edu.ph:faculty_research-32642022-08-30T02:17:04Z Effects of salinity on the CO2 permeation across lipid bilayer for microalgae biofixation: A molecular dynamics study Manrique, Robby Moreno, Joaquin Lorenzo Villagracia, Al Rey C. Ubando, Aristotle T. Kasai, Hideaki Arboleda, Nelson B., Jr. David, Melanie Y. Culaba, Alvin B. The continuous threat of increasing CO2 concentration in the atmosphere has altered the carbon balance of our planet causing global climate change. Biological fixation of atmospheric CO2 by unicellular microorganisms such as microalgae is a promising technology pursued extensively by researchers as a means for carbon capture. The study aimed to provide an atomic level of study that will demonstrate the effect of the salinity on the mechanism of CO2 absorption across microalgae lipid bilayer. Molecular dynamics simulations were utilized to calculate the free energies of CO2 molecule as it permeates inside the microalgae cell. In thermodynamics, the transport process of a molecule can be demonstrated through its free energy gradient. Thus, calculating the free energies of CO2 molecule across microalgae lipid bilayer can elucidate the mechanisms of permeation processes. Four microalgae lipid bilayer structures were constructed that contains 128-DPPC (dipalmitoylphosphatidylcholine) lipid bilayer with 3640 water molecules with different NaCl concentrations: 0, 3, 13, and 19 NaCl molecules which correspond to a salinity level of 0, 50, 200, and 300 mM, respectively. The cavity insertion Widom method was used to calculate the free energy of CO2 molecule along the lipid bilayer. The results demonstrated that the salinity does not affect the free energies significantly, thus, it does not hamper CO2 transport across microalgae lipid membrane. © 2017, Springer Science+Business Media Dordrecht. 2018-02-01T08:00:00Z text text/html https://animorepository.dlsu.edu.ph/faculty_research/2265 https://animorepository.dlsu.edu.ph/context/faculty_research/article/3264/type/native/viewcontent Faculty Research Work Animo Repository Microalgae Carbon sequestration Molecular dynamics Lipids Mechanical Engineering
institution De La Salle University
building De La Salle University Library
continent Asia
country Philippines
Philippines
content_provider De La Salle University Library
collection DLSU Institutional Repository
topic Microalgae
Carbon sequestration
Molecular dynamics
Lipids
Mechanical Engineering
spellingShingle Microalgae
Carbon sequestration
Molecular dynamics
Lipids
Mechanical Engineering
Manrique, Robby
Moreno, Joaquin Lorenzo
Villagracia, Al Rey C.
Ubando, Aristotle T.
Kasai, Hideaki
Arboleda, Nelson B., Jr.
David, Melanie Y.
Culaba, Alvin B.
Effects of salinity on the CO2 permeation across lipid bilayer for microalgae biofixation: A molecular dynamics study
description The continuous threat of increasing CO2 concentration in the atmosphere has altered the carbon balance of our planet causing global climate change. Biological fixation of atmospheric CO2 by unicellular microorganisms such as microalgae is a promising technology pursued extensively by researchers as a means for carbon capture. The study aimed to provide an atomic level of study that will demonstrate the effect of the salinity on the mechanism of CO2 absorption across microalgae lipid bilayer. Molecular dynamics simulations were utilized to calculate the free energies of CO2 molecule as it permeates inside the microalgae cell. In thermodynamics, the transport process of a molecule can be demonstrated through its free energy gradient. Thus, calculating the free energies of CO2 molecule across microalgae lipid bilayer can elucidate the mechanisms of permeation processes. Four microalgae lipid bilayer structures were constructed that contains 128-DPPC (dipalmitoylphosphatidylcholine) lipid bilayer with 3640 water molecules with different NaCl concentrations: 0, 3, 13, and 19 NaCl molecules which correspond to a salinity level of 0, 50, 200, and 300 mM, respectively. The cavity insertion Widom method was used to calculate the free energy of CO2 molecule along the lipid bilayer. The results demonstrated that the salinity does not affect the free energies significantly, thus, it does not hamper CO2 transport across microalgae lipid membrane. © 2017, Springer Science+Business Media Dordrecht.
format text
author Manrique, Robby
Moreno, Joaquin Lorenzo
Villagracia, Al Rey C.
Ubando, Aristotle T.
Kasai, Hideaki
Arboleda, Nelson B., Jr.
David, Melanie Y.
Culaba, Alvin B.
author_facet Manrique, Robby
Moreno, Joaquin Lorenzo
Villagracia, Al Rey C.
Ubando, Aristotle T.
Kasai, Hideaki
Arboleda, Nelson B., Jr.
David, Melanie Y.
Culaba, Alvin B.
author_sort Manrique, Robby
title Effects of salinity on the CO2 permeation across lipid bilayer for microalgae biofixation: A molecular dynamics study
title_short Effects of salinity on the CO2 permeation across lipid bilayer for microalgae biofixation: A molecular dynamics study
title_full Effects of salinity on the CO2 permeation across lipid bilayer for microalgae biofixation: A molecular dynamics study
title_fullStr Effects of salinity on the CO2 permeation across lipid bilayer for microalgae biofixation: A molecular dynamics study
title_full_unstemmed Effects of salinity on the CO2 permeation across lipid bilayer for microalgae biofixation: A molecular dynamics study
title_sort effects of salinity on the co2 permeation across lipid bilayer for microalgae biofixation: a molecular dynamics study
publisher Animo Repository
publishDate 2018
url https://animorepository.dlsu.edu.ph/faculty_research/2265
https://animorepository.dlsu.edu.ph/context/faculty_research/article/3264/type/native/viewcontent
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