Understanding COVID-19 Dynamics and the Effects of Interventions in the Philippines: A Mathematical Modelling Study
Background COVID-19 initially caused less severe outbreaks in many low- and middle-income countries (LMIC) compared with many high-income countries; possibly because of differing demographics; socioeconomics; surveillance; and policy responses. Here; we investigate the role of multiple factors on CO...
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2021
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ph-ateneo-arc.mathematics-faculty-pubs-11742021-12-02T05:16:08Z Understanding COVID-19 Dynamics and the Effects of Interventions in the Philippines: A Mathematical Modelling Study Caldwell, Jamie M De Lara-Tuprio, Elvira P Teng, Timothy Robin Y Estuar, Ma. Regina Justina E Sarmiento, Raymond Francis R Eng, Milinda Abayawardana B Leong, Robert Neil F Gray, Richard T Wood, James G Le, Linh-Vi McBryde, Emma S Ragonnet, Romain Trauer, James M Background COVID-19 initially caused less severe outbreaks in many low- and middle-income countries (LMIC) compared with many high-income countries; possibly because of differing demographics; socioeconomics; surveillance; and policy responses. Here; we investigate the role of multiple factors on COVID-19 dynamics in the Philippines; a LMIC that has had a relatively severe COVID-19 outbreak. Methods We applied an age-structured compartmental model that incorporated time-varying mobility; testing; and personal protective behaviors (through a “Minimum Health Standards” policy; MHS) to represent the first wave of the Philippines COVID-19 epidemic nationally and for three highly affected regions (Calabarzon; Central Visayas; and the National Capital Region). We estimated effects of control measures; key epidemiological parameters; and interventions. Findings Population age structure; contact rates; mobility; testing; and MHS were sufficient to explain the Philippines epidemic based on the good fit between modelled and reported cases; hospitalisations; and deaths. The model indicated that MHS reduced the probability of transmission per contact by 13-27%. The February 2021 case detection rate was estimated at ~8%; population recovered at ~9%; and scenario projections indicated high sensitivity to MHS adherence. Interpretation COVID-19 dynamics in the Philippines are driven by age; contact structure; mobility; and MHS adherence. Continued compliance with low-cost MHS should help the Philippines control the epidemic until vaccines are widely distributed; but disease resurgence may be occurring due to a combination of low population immunity and detection rates and new variants of concern. 2021-07-14T07:00:00Z text application/pdf https://archium.ateneo.edu/mathematics-faculty-pubs/175 https://archium.ateneo.edu/cgi/viewcontent.cgi?article=1174&context=mathematics-faculty-pubs Mathematics Faculty Publications Archīum Ateneo COVID-19 Philippines LMIC SEIR Minimum Health Standards policy Applied Mathematics Public Health |
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COVID-19 Philippines LMIC SEIR Minimum Health Standards policy Applied Mathematics Public Health Caldwell, Jamie M De Lara-Tuprio, Elvira P Teng, Timothy Robin Y Estuar, Ma. Regina Justina E Sarmiento, Raymond Francis R Eng, Milinda Abayawardana B Leong, Robert Neil F Gray, Richard T Wood, James G Le, Linh-Vi McBryde, Emma S Ragonnet, Romain Trauer, James M Understanding COVID-19 Dynamics and the Effects of Interventions in the Philippines: A Mathematical Modelling Study |
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Background
COVID-19 initially caused less severe outbreaks in many low- and middle-income countries (LMIC) compared with many high-income countries; possibly because of differing demographics; socioeconomics; surveillance; and policy responses. Here; we investigate the role of multiple factors on COVID-19 dynamics in the Philippines; a LMIC that has had a relatively severe COVID-19 outbreak.
Methods
We applied an age-structured compartmental model that incorporated time-varying mobility; testing; and personal protective behaviors (through a “Minimum Health Standards” policy; MHS) to represent the first wave of the Philippines COVID-19 epidemic nationally and for three highly affected regions (Calabarzon; Central Visayas; and the National Capital Region). We estimated effects of control measures; key epidemiological parameters; and interventions.
Findings
Population age structure; contact rates; mobility; testing; and MHS were sufficient to explain the Philippines epidemic based on the good fit between modelled and reported cases; hospitalisations; and deaths. The model indicated that MHS reduced the probability of transmission per contact by 13-27%. The February 2021 case detection rate was estimated at ~8%; population recovered at ~9%; and scenario projections indicated high sensitivity to MHS adherence.
Interpretation
COVID-19 dynamics in the Philippines are driven by age; contact structure; mobility; and MHS adherence. Continued compliance with low-cost MHS should help the Philippines control the epidemic until vaccines are widely distributed; but disease resurgence may be occurring due to a combination of low population immunity and detection rates and new variants of concern. |
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author |
Caldwell, Jamie M De Lara-Tuprio, Elvira P Teng, Timothy Robin Y Estuar, Ma. Regina Justina E Sarmiento, Raymond Francis R Eng, Milinda Abayawardana B Leong, Robert Neil F Gray, Richard T Wood, James G Le, Linh-Vi McBryde, Emma S Ragonnet, Romain Trauer, James M |
author_facet |
Caldwell, Jamie M De Lara-Tuprio, Elvira P Teng, Timothy Robin Y Estuar, Ma. Regina Justina E Sarmiento, Raymond Francis R Eng, Milinda Abayawardana B Leong, Robert Neil F Gray, Richard T Wood, James G Le, Linh-Vi McBryde, Emma S Ragonnet, Romain Trauer, James M |
author_sort |
Caldwell, Jamie M |
title |
Understanding COVID-19 Dynamics and the Effects of Interventions in the Philippines: A Mathematical Modelling Study |
title_short |
Understanding COVID-19 Dynamics and the Effects of Interventions in the Philippines: A Mathematical Modelling Study |
title_full |
Understanding COVID-19 Dynamics and the Effects of Interventions in the Philippines: A Mathematical Modelling Study |
title_fullStr |
Understanding COVID-19 Dynamics and the Effects of Interventions in the Philippines: A Mathematical Modelling Study |
title_full_unstemmed |
Understanding COVID-19 Dynamics and the Effects of Interventions in the Philippines: A Mathematical Modelling Study |
title_sort |
understanding covid-19 dynamics and the effects of interventions in the philippines: a mathematical modelling study |
publisher |
Archīum Ateneo |
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2021 |
url |
https://archium.ateneo.edu/mathematics-faculty-pubs/175 https://archium.ateneo.edu/cgi/viewcontent.cgi?article=1174&context=mathematics-faculty-pubs |
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