Identification of synonymous constraint elements in the protein-coding region of dengue serotype 2 quasispecies from next generation sequencing data

• Main Author: GALARION, MA. JOWINA
• Format: text
• Published: Archīum Ateneo 2018
• Subjects: Dengue viruses; RNA viruses; Gene mapping; Nucleotide sequence > Data processing; Comparative genomics; Genomics; Mutagenesis.
• Online Access: https://archium.ateneo.edu/theses-dissertations/77; http://rizalls.lib.admu.edu.ph/#section=resource&resourceid=1559028689&currentIndex=0&view=fullDetailsDetailsTab
• Institution: Ateneo De Manila University

This study used bioinformatics tools to systematically identify synonymous constraint elements (SCEs) in the dengue serotype 2 quasispecies, which are signatures of probable overlapping functional elements in the viral genome. Sequencing data used in the analysis was generated using next generation...