RegaDB : community-driven data management and analysis for infectious diseases

• Main Authors: Libin, Pieter, Beheydt, Gertjan, Deforche, Koen, Imbrechts, Stijn, Ferreira, Fossie, Laethem, Kristel Van, Theys, Kristof, Carvalho, Ana Patricia, Cavaco-Silva, Joana, Lapadula, Giuseppe, Torti, Carlo, Assel, Matthias, Wesner, Stefan, Snoeck, Joke, Ruelle, Jean, Bel, Annelies De, Lacor, Patrick, Munter, Paul De, Wijngaerden, Eric Van, Zazzi, Maurizio, Kaiser, Rolf, Ayouba, Ahidjo, Peeters, Martine, Oliveira, Tulio de, Alcantara, Luiz Carlos Junior, Grossman, Zehava, Sloot, Peter, Otelea, Dan, Paraschiv, Simona, Boucher, Charles, Camacho, Ricardo, Vandamme, Anne-Mieke
• Other Authors: School of Computer Engineering
• Format: Article
• Language: English
• Published: 2014
• Subjects: DRNTU::Engineering::Computer science and engineering::Computer applications::Life and medical sciences
• Online Access: https://hdl.handle.net/10356/102052; http://hdl.handle.net/10220/18847
• Institution: Nanyang Technological University

Summary: RegaDB is a free and open source data management and analysis environment for infectious diseases. RegaDB allows clinicians to store, manage and analyze patient data, including viral genetic sequences. Moreover, RegaDB provides researchers with a mechanism to collect data in a uniform format and offers them a canvas to make newly developed bioinformatics tools available to clinicians and virologists through a user friendly interface. Availability and implementation: Source code, binaries and documentation are available on http://regaweb.med.kuleuven.be/software/regadb/ RegaDB is written in the Java programming language, using a web-service oriented architecture. Contact: [e-mail] Supplementary information: Supplementary material demonstrating the functionalities of the system is available at Bioinformatics online.