利用亲水富集策略分析人血浆中N-糖基化蛋白及N-糖类型 = Analysis of N-glycosylated protein and N-glycans in human plasma by hydrophilic enrichment strategy

蛋白质的N- 糖基化是最重要的翻译后修饰之一, 许多已知的血浆肿瘤诊断标志物及治疗靶标都是N- 糖基化 蛋白。 针对血浆的糖蛋白质组研究有利于发现新的蛋白标志物。然而,血浆蛋白质浓度分布的动态范围非常宽,且同一位点上的糖链存在微观不均一性,影响了血浆中糖蛋白的鉴定效率。本文利用亲水材料ZIC-HILIC制备亲 水富集柱分别对人血浆中的N- 糖链和N- 糖肽进行富集,并结合碱性反相色谱进行肽段的预分离和高准确度质谱 分析,最终在健康人的血浆中鉴定到了 299 个糖基化蛋白、637 个糖基化位点,并识别出 31 种不同的糖型。在这些 鉴定到的糖基化位点中,新发现有 107 个 N- 糖基化位点(占...

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Main Authors: 马成 Ma, Cheng, 潘一廷 Pan, Yiting, 张琪 Zhang, Qi, 王继峰 Wang, Jifeng, 钱小红 Qian, Xiaohong, 应万涛 Ying, Wantao
Other Authors: School of Biological Sciences
Format: Article
Language:Chinese
Published: 2015
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Online Access:https://hdl.handle.net/10356/106581
http://hdl.handle.net/10220/25055
http://www.chrom-china.com/EN/abstract/abstract13508.shtml
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spelling sg-ntu-dr.10356-1065812023-02-28T17:00:30Z 利用亲水富集策略分析人血浆中N-糖基化蛋白及N-糖类型 = Analysis of N-glycosylated protein and N-glycans in human plasma by hydrophilic enrichment strategy 马成 Ma, Cheng 潘一廷 Pan, Yiting 张琪 Zhang, Qi 王继峰 Wang, Jifeng 钱小红 Qian, Xiaohong 应万涛 Ying, Wantao School of Biological Sciences DRNTU::Science::Physics DRNTU::Science::Biological sciences 蛋白质的N- 糖基化是最重要的翻译后修饰之一, 许多已知的血浆肿瘤诊断标志物及治疗靶标都是N- 糖基化 蛋白。 针对血浆的糖蛋白质组研究有利于发现新的蛋白标志物。然而,血浆蛋白质浓度分布的动态范围非常宽,且同一位点上的糖链存在微观不均一性,影响了血浆中糖蛋白的鉴定效率。本文利用亲水材料ZIC-HILIC制备亲 水富集柱分别对人血浆中的N- 糖链和N- 糖肽进行富集,并结合碱性反相色谱进行肽段的预分离和高准确度质谱 分析,最终在健康人的血浆中鉴定到了 299 个糖基化蛋白、637 个糖基化位点,并识别出 31 种不同的糖型。在这些 鉴定到的糖基化位点中,新发现有 107 个 N- 糖基化位点(占总位点数的 16.8%)。 本方法操作简单,可以有效富集N- 糖肽和 N- 糖,为在血浆中寻找糖蛋白和糖链生物标志物提供了可靠的手段。N-glycosylation of proteins is one of the most important post-translational modifications (PTM). Many diagnostic biomarkers and therapeutic targets are glycosylated proteins. However, it is still a big challenge to identify glycoproteins in human plasma, because of the high dynamic range and microheterogeneity of glycosylation. In this work, hydrophilic interaction liquid chromatography (HILIC) enrichment, high-pH reversed-phase prefractionation and high accurate mass spectrometry (MS) analysis were combined to profile the N-glycoproteins in human plasma. In total, 637 N-glycosites from 299 glycoproteins (protein groups) were identified. There were also 31 glycoforms recognized after HILIC enrichment and MS analysis. Among the results, 107 glycosylation sites (16.8%) are newly found. This study provided a simple and reliable strategy for exploring potential N-glycoprotein biomarkers from complicated biological systems. Published version 2015-02-13T06:28:07Z 2019-12-06T22:14:30Z 2015-02-13T06:28:07Z 2019-12-06T22:14:30Z 2013 2013 Journal Article Ma, C., Pan, Y., Zhang, Q., Wang J., Qian, X., & Ying, W. (2013). Analysis of N-glycosylated protein and N-glycans in human plasma by hydrophilic enrichment strategy. Chinese journal of chromatography, 31(11), 1057-1063. 1872-2059 https://hdl.handle.net/10356/106581 http://hdl.handle.net/10220/25055 http://www.chrom-china.com/EN/abstract/abstract13508.shtml zh Chinese journal of chromatography © 2013 Science Press. This paper was published in Chinese Journal of Chromatography and is made available as an electronic reprint (preprint) with permission of Science Press. The paper can be found at the following URL: [http://www.chrom-china.com/EN/abstract/abstract13508.shtml].  One print or electronic copy may be made for personal use only. Systematic or multiple reproduction, distribution to multiple locations via electronic or other means, duplication of any material in this paper for a fee or for commercial purposes, or modification of the content of the paper is prohibited and is subject to penalties under law. application/pdf
institution Nanyang Technological University
building NTU Library
continent Asia
country Singapore
Singapore
content_provider NTU Library
collection DR-NTU
language Chinese
topic DRNTU::Science::Physics
DRNTU::Science::Biological sciences
spellingShingle DRNTU::Science::Physics
DRNTU::Science::Biological sciences
马成 Ma, Cheng
潘一廷 Pan, Yiting
张琪 Zhang, Qi
王继峰 Wang, Jifeng
钱小红 Qian, Xiaohong
应万涛 Ying, Wantao
利用亲水富集策略分析人血浆中N-糖基化蛋白及N-糖类型 = Analysis of N-glycosylated protein and N-glycans in human plasma by hydrophilic enrichment strategy
description 蛋白质的N- 糖基化是最重要的翻译后修饰之一, 许多已知的血浆肿瘤诊断标志物及治疗靶标都是N- 糖基化 蛋白。 针对血浆的糖蛋白质组研究有利于发现新的蛋白标志物。然而,血浆蛋白质浓度分布的动态范围非常宽,且同一位点上的糖链存在微观不均一性,影响了血浆中糖蛋白的鉴定效率。本文利用亲水材料ZIC-HILIC制备亲 水富集柱分别对人血浆中的N- 糖链和N- 糖肽进行富集,并结合碱性反相色谱进行肽段的预分离和高准确度质谱 分析,最终在健康人的血浆中鉴定到了 299 个糖基化蛋白、637 个糖基化位点,并识别出 31 种不同的糖型。在这些 鉴定到的糖基化位点中,新发现有 107 个 N- 糖基化位点(占总位点数的 16.8%)。 本方法操作简单,可以有效富集N- 糖肽和 N- 糖,为在血浆中寻找糖蛋白和糖链生物标志物提供了可靠的手段。N-glycosylation of proteins is one of the most important post-translational modifications (PTM). Many diagnostic biomarkers and therapeutic targets are glycosylated proteins. However, it is still a big challenge to identify glycoproteins in human plasma, because of the high dynamic range and microheterogeneity of glycosylation. In this work, hydrophilic interaction liquid chromatography (HILIC) enrichment, high-pH reversed-phase prefractionation and high accurate mass spectrometry (MS) analysis were combined to profile the N-glycoproteins in human plasma. In total, 637 N-glycosites from 299 glycoproteins (protein groups) were identified. There were also 31 glycoforms recognized after HILIC enrichment and MS analysis. Among the results, 107 glycosylation sites (16.8%) are newly found. This study provided a simple and reliable strategy for exploring potential N-glycoprotein biomarkers from complicated biological systems.
author2 School of Biological Sciences
author_facet School of Biological Sciences
马成 Ma, Cheng
潘一廷 Pan, Yiting
张琪 Zhang, Qi
王继峰 Wang, Jifeng
钱小红 Qian, Xiaohong
应万涛 Ying, Wantao
format Article
author 马成 Ma, Cheng
潘一廷 Pan, Yiting
张琪 Zhang, Qi
王继峰 Wang, Jifeng
钱小红 Qian, Xiaohong
应万涛 Ying, Wantao
author_sort 马成 Ma, Cheng
title 利用亲水富集策略分析人血浆中N-糖基化蛋白及N-糖类型 = Analysis of N-glycosylated protein and N-glycans in human plasma by hydrophilic enrichment strategy
title_short 利用亲水富集策略分析人血浆中N-糖基化蛋白及N-糖类型 = Analysis of N-glycosylated protein and N-glycans in human plasma by hydrophilic enrichment strategy
title_full 利用亲水富集策略分析人血浆中N-糖基化蛋白及N-糖类型 = Analysis of N-glycosylated protein and N-glycans in human plasma by hydrophilic enrichment strategy
title_fullStr 利用亲水富集策略分析人血浆中N-糖基化蛋白及N-糖类型 = Analysis of N-glycosylated protein and N-glycans in human plasma by hydrophilic enrichment strategy
title_full_unstemmed 利用亲水富集策略分析人血浆中N-糖基化蛋白及N-糖类型 = Analysis of N-glycosylated protein and N-glycans in human plasma by hydrophilic enrichment strategy
title_sort 利用亲水富集策略分析人血浆中n-糖基化蛋白及n-糖类型 = analysis of n-glycosylated protein and n-glycans in human plasma by hydrophilic enrichment strategy
publishDate 2015
url https://hdl.handle.net/10356/106581
http://hdl.handle.net/10220/25055
http://www.chrom-china.com/EN/abstract/abstract13508.shtml
_version_ 1759855098216841216