A microfluidic gradient mixer-flow chamber as a new tool to study biofilm development under defined solute gradients

Understanding the dynamics of biofilm development in response to chemical cues and signals is required toward the development of controllable biofilm‐mediated bioprocesses. In this study, we report a new biofilm growth system that integrates a microfluidic gradient mixer with a biofilm growth chambe...

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Main Authors: Zhang, Yingdan, Li, Cheng, Wu, Yichao, Zhang, Yilei, Zhou, Zhi, Cao, Bin
Other Authors: School of Civil and Environmental Engineering
Format: Article
Language:English
Published: 2019
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Online Access:https://hdl.handle.net/10356/106920
http://hdl.handle.net/10220/50252
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Institution: Nanyang Technological University
Language: English
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spelling sg-ntu-dr.10356-1069202020-09-21T11:35:10Z A microfluidic gradient mixer-flow chamber as a new tool to study biofilm development under defined solute gradients Zhang, Yingdan Li, Cheng Wu, Yichao Zhang, Yilei Zhou, Zhi Cao, Bin School of Civil and Environmental Engineering School of Mechanical and Aerospace Engineering Singapore Centre for Environmental Life Sciences and Engineering Biofilm Solute Gradient Engineering::Civil engineering Understanding the dynamics of biofilm development in response to chemical cues and signals is required toward the development of controllable biofilm‐mediated bioprocesses. In this study, we report a new biofilm growth system that integrates a microfluidic gradient mixer with a biofilm growth chamber. The biofilm growth system allows biofilms to grow under defined solute gradients and enables nondestructive monitoring of the biofilm development dynamics in response to the defined gradients. The solute gradients generated in the system were simulated and then validated experimentally. We then demonstrated the applicability of the biofilm growth system in studying biofilm development under defined solute gradients. Specifically, we examined biofilm development of Shewanella oneidensis and Comamonas testosteroni under a defined calcium and nitrate gradient, respectively. Using two C. testosteroni strains (WDL7 and I2), we further demonstrated the applicability of our biofilm growth system to study the development of coculture biofilms under a defined solute gradient. Our results show that the biofilm growth system we have developed here can be a promising tool to reveal the dynamics of biofilm development in response to chemical cues and signals as well as the interorganism interactions in coculture biofilms. Accepted version 2019-10-23T09:13:54Z 2019-12-06T22:21:04Z 2019-10-23T09:13:54Z 2019-12-06T22:21:04Z 2019 Journal Article Zhang, Y., Li, C., Wu, Y., Zhang, Y., Zhou, Z., & Cao, B. (2019). A microfluidic gradient mixer-flow chamber as a new tool to study biofilm development under defined solute gradients. Biotechnology and Bioengineering, 116(1), 54-64. doi:10.1002/bit.26852 0006-3592 https://hdl.handle.net/10356/106920 http://hdl.handle.net/10220/50252 10.1002/bit.26852 en Biotechnology and Bioengineering This is the peer reviewed version of the following article: Zhang, Y., Li, C., Wu, Y., Zhang, Y., Zhou, Z., & Cao, B. (2019). A microfluidic gradient mixer-flow chamber as a new tool to study biofilm development under defined solute gradients. Biotechnology and Bioengineering, 116(1), 54-64., which has been published in final form at http://dx.doi.org/10.1002/bit.26852. This article may be used for non-commercial purposes in accordance with Wiley Terms and Conditions for Use of Self-Archived Versions. 32 p. application/pdf
institution Nanyang Technological University
building NTU Library
country Singapore
collection DR-NTU
language English
topic Biofilm
Solute Gradient
Engineering::Civil engineering
spellingShingle Biofilm
Solute Gradient
Engineering::Civil engineering
Zhang, Yingdan
Li, Cheng
Wu, Yichao
Zhang, Yilei
Zhou, Zhi
Cao, Bin
A microfluidic gradient mixer-flow chamber as a new tool to study biofilm development under defined solute gradients
description Understanding the dynamics of biofilm development in response to chemical cues and signals is required toward the development of controllable biofilm‐mediated bioprocesses. In this study, we report a new biofilm growth system that integrates a microfluidic gradient mixer with a biofilm growth chamber. The biofilm growth system allows biofilms to grow under defined solute gradients and enables nondestructive monitoring of the biofilm development dynamics in response to the defined gradients. The solute gradients generated in the system were simulated and then validated experimentally. We then demonstrated the applicability of the biofilm growth system in studying biofilm development under defined solute gradients. Specifically, we examined biofilm development of Shewanella oneidensis and Comamonas testosteroni under a defined calcium and nitrate gradient, respectively. Using two C. testosteroni strains (WDL7 and I2), we further demonstrated the applicability of our biofilm growth system to study the development of coculture biofilms under a defined solute gradient. Our results show that the biofilm growth system we have developed here can be a promising tool to reveal the dynamics of biofilm development in response to chemical cues and signals as well as the interorganism interactions in coculture biofilms.
author2 School of Civil and Environmental Engineering
author_facet School of Civil and Environmental Engineering
Zhang, Yingdan
Li, Cheng
Wu, Yichao
Zhang, Yilei
Zhou, Zhi
Cao, Bin
format Article
author Zhang, Yingdan
Li, Cheng
Wu, Yichao
Zhang, Yilei
Zhou, Zhi
Cao, Bin
author_sort Zhang, Yingdan
title A microfluidic gradient mixer-flow chamber as a new tool to study biofilm development under defined solute gradients
title_short A microfluidic gradient mixer-flow chamber as a new tool to study biofilm development under defined solute gradients
title_full A microfluidic gradient mixer-flow chamber as a new tool to study biofilm development under defined solute gradients
title_fullStr A microfluidic gradient mixer-flow chamber as a new tool to study biofilm development under defined solute gradients
title_full_unstemmed A microfluidic gradient mixer-flow chamber as a new tool to study biofilm development under defined solute gradients
title_sort microfluidic gradient mixer-flow chamber as a new tool to study biofilm development under defined solute gradients
publishDate 2019
url https://hdl.handle.net/10356/106920
http://hdl.handle.net/10220/50252
_version_ 1681058682451787776