Disassembly and trimer formation of E2 protein cage : the effects of C-terminus, salt, and protonation state

Disassembly and trimer formation of E2 protein cage : the effects of C-terminus, salt, and protonation state

E2 protein cages, which consist of the assembled 60 subunits, were simulated at two levels of protonation to mimic their electrostatic properties at pH 4 and 7 using all-atom models. Starting with the initial configuration of the assembled 60-mer, either the truncation of C-terminus or the protonati...

Saved in:

書目詳細資料
Main Authors:	Lee, Hwankyu, Lim, Sierin
其他作者:	School of Chemical and Biomedical Engineering
格式:	Article
語言:	English
出版:	2020
主題:	Engineering::Chemical engineering Molecular Dynamics Simulation Protein Self-assembly
在線閱讀:	https://hdl.handle.net/10356/136740
標簽:	添加標簽沒有標簽, 成為第一個標記此記錄!
機構:	Nanyang Technological University
語言:	English

相似書籍

Isolating a trimer intermediate in the self-assembly of E2 protein cage
由: Peng, Tao, et al.
出版: (2013)

The nanostructure formations on the stranski krastanow film-substrate system
由: HUANG ZHIJUN
出版: (2010)

COMPUTER SIMULATIONS ON SELF-ASSEMBLY OF BLOCK COPOLYMERS
由: AMMU PRHASHANNA
出版: (2016)

Synthesis of Cobalt Phosphide Nanoparticles Supported on Pristine Graphene by Dynamically Self-Assembled Graphene Quantum Dots for Hydrogen Evolution
由: Wang, Xiaoyan, et al.
出版: (2017)

Micropatterning of proteins on nanospheres
由: Zhang, Y.
出版: (2014)

Simulation of surface evolution of quantum dot using meshfree approximation
由: Quek, S.S., et al.
出版: (2014)

Trimeric reassembly of the globular domain of human C1q
由: Tacnet, P., et al.
出版: (2014)

Long range recognition and selection in IDPs: The interactions of the C-terminus of p53
由: Kannan, S, et al.
出版: (2020)

Evaluation of the use of amphipathic peptide-based protein carrier for in vitro cancer research
由: Lo, S.L., et al.
出版: (2014)

Fuzzy complex formation between the intrinsically disordered prothymosin α and the Kelch domain of keap1 involved in the oxidative stress response
由: Khan, H., et al.
出版: (2014)

Synthesis and formation mechanism of all-organic block copolymer-directed templating of laser-induced crystalline silicon nanostructures
由: Tan, Kwan Wee, et al.
出版: (2020)

Efficient preparation of separable pseudo[n]rotaxanes by selective threading of oligoalkylammonium salts with cucurbit[7]uril
由: Yin, J., et al.
出版: (2014)

Intracellular delivery of biologically active proteins with peptide-based carriers
由: Lo, S.L., et al.
出版: (2014)

A β-sheet structure interacting peptide for intracellular protein delivery into human pluripotent stem cells and their derivatives
由: Lo, S.L., et al.
出版: (2014)

DNA-directed assembly of protein microarrays
由: Tang, Y.C., et al.
出版: (2014)

Self-assembled chiral photonic crystals from a colloidal helix racemate
由: Lei, Qun-li, et al.
出版: (2020)

Synthesis and characterization of nanothermite system
由: Tan, Gibson Kuan Han
出版: (2013)

Study of scattering events in embedded magnetic nanostructures
由: Verma, L.K., et al.
出版: (2014)

The effect of solvent quality on pathway-dependent solution-state self-assembly of an amphiphilic diblock copolymer
由: Venkataraman, Shrinivas, et al.
出版: (2020)

Three-dimensional structure of Megabalanus rosa cement protein 20 revealed by multi-dimensional NMR and molecular dynamics simulations
由: Mohanram, Harini, et al.
出版: (2021)

Self-assembly of gold(I) rings and reversible formation of organometallic [2]catenanes
由: McArdle, C.P., et al.
出版: (2014)

Self-assembled nanofibrous marine collagen matrix accelerates healing of full-thickness wounds
由: Liu, Shao Qiong, et al.
出版: (2022)

Self-assembled biophotonic lasing network driven by amyloid fibrils in microcavities
由: Gong, Chaoyang, et al.
出版: (2022)

The crystallization of decanoic acid/dopamine supramolecular self-assemblies in the presence of coacervates
由: Zhou, Lili, et al.
出版: (2022)

Interfacial colloidal self-assembly for functional materials
由: Hou, Shuai, et al.
出版: (2023)

Spatially addressable protein array: ssDNA-directed assembly for antibody microarray
由: Ng, J.K., et al.
出版: (2011)

Prediction of crystallization of a colloid-protein complex by controlled complex self-assembly at the solution surface
由: Yang, Shu, et al.
出版: (2022)

AN INTEGRATIVE APPROACH TO STUDY VIRAL STRUCTURAL PROTEIN CONFORMATIONAL DYNAMICS AND STRUCTURE
由: PALUR VENKATA RAGHUVAMSI
出版: (2022)

Direct comparison between millifluidic and bulk-mixing platform in the synthesis of amorphous drug-polysaccharide nanoparticle complex
由: Dong, Bingxue, et al.
出版: (2020)

Chitosan/poly (acrylic acid) based fiber-optic surface plasmon resonance sensor for Cu2+ ions detection
由: Ding, Zhe-Wen, et al.
出版: (2021)

Mechanism behind the formation of self-assembled nano-sized clusters in Diamond-like carbon nanocomposite
由: Foong, Y.M., et al.
出版: (2014)

CAD model based virtual assembly simulation, planning and training
由: Leu, M.C., et al.
出版: (2014)

Formation of ordered two-dimensional nanostructures of Cu on the Si(1 1 1)-(7 × 7) surface
由: Zhang, Y.P., et al.
出版: (2014)

SELF-ASSEMBLY AND DRUG DELIVERY IN AMPHIPHILIC PEPTIDES: MICROSCOPIC INSIGHTS FROM COARSE-GRAINED SIMULATIONS
由: NARESH THOTA
出版: (2015)

Entropy Stabilizes Floppy Crystals of Mobile DNA-Coated Colloids
由: Hu, Hao, et al.
出版: (2018)

Oligopeptide self-assembly: mechanisms, stimuli-responsiveness, and biomedical applications
由: Ge, Lei, et al.
出版: (2024)

Integration of nanoparticles with protein microarrays
由: Zhang, Y.
出版: (2014)

PH-Controllable cyclic threading/dethreading of polypseudorotaxane obtained from cyclodextrins and poly(amino ester)
由: Sun, G., et al.
出版: (2014)

Structural basis of oligomerization of n-terminal domain of spider aciniform silk protein
由: Chakraborty, R., et al.
出版: (2021)

Solvent-assisted surface engineering for high-performance all-inorganic perovskite nanocrystal light-emitting diodes
由: Wang, Lin, et al.
出版: (2020)