Commentary : current status and issues regarding pre-processing of fnirs neuroimaging data : an investigation of diverse signal filtering methods within a general linear model framework

We read with great interest the manuscript from Pinti et al. (2019), which aimed to shed a light on one of the main open topics in neuroimaging: the definition of reproducible and standardized pipelines for the preprocessing of functional Near InfraRed Spectroscopy (fNIRS) signals. In particular, Pi...

Full description

Saved in:
Bibliographic Details
Main Authors: Bizzego, Andrea, Balagtas, Jan Paolo M., Esposito, Gianluca
Other Authors: School of Social Sciences
Format: Article
Language:English
Published: 2020
Subjects:
Online Access:https://hdl.handle.net/10356/144367
Tags: Add Tag
No Tags, Be the first to tag this record!
Institution: Nanyang Technological University
Language: English
id sg-ntu-dr.10356-144367
record_format dspace
spelling sg-ntu-dr.10356-1443672023-03-05T15:32:32Z Commentary : current status and issues regarding pre-processing of fnirs neuroimaging data : an investigation of diverse signal filtering methods within a general linear model framework Bizzego, Andrea Balagtas, Jan Paolo M. Esposito, Gianluca School of Social Sciences Lee Kong Chian School of Medicine (LKCMedicine) Social sciences::Psychology fNIRS Signal Processing We read with great interest the manuscript from Pinti et al. (2019), which aimed to shed a light on one of the main open topics in neuroimaging: the definition of reproducible and standardized pipelines for the preprocessing of functional Near InfraRed Spectroscopy (fNIRS) signals. In particular, Pinti and colleagues focused on the filtering step, evidencing a high heterogeneity of filter types adopted and settings that could undermine the reproducibility of the studies. Thanks to technological progress, a new generation of fNIRS devices can be used to collect brain activity signals within diverse settings and contexts (e.g., multi-modal and multi-person experimental designs; Azhari et al., 2019, 2020) and for diverse applications (e.g., to study the dynamics of the human brain network; Vergotte et al., 2017). The proliferation of use cases and applications brings up the possibility of fragmentation of the knowledge, unless the scientific community begins to adopt rigorous and standardized methods to allow comparability and reproducibility of the findings. Ministry of Education (MOE) Nanyang Technological University Published version This study was supported by NAP SUG 2015 (GE), Singapore Ministry of Education ACR Tier 1 (GE; RG149/16 and RT10/19), and a Post-doctoral Fellowship within MIUR programme framework Dipartimenti di Eccellenza (DiPSCO, University of Trento, AB). 2020-11-02T04:31:40Z 2020-11-02T04:31:40Z 2020 Journal Article Bizzego, A., Balagtas, J. P. M., & Esposito, G. (2020). Commentary : current status and issues regarding pre-processing of fnirs neuroimaging data : an investigation of diverse signal filtering methods within a general linear model framework. Frontiers in Human Neuroscience, 14, 247-. doi: 10.3389/fnhum.2020.00247 1662-5161 https://hdl.handle.net/10356/144367 10.3389/fnhum.2020.00247 32760261 14 en NAP SUG 2015 (GE) RG149/16 RT10/19 Frontiers in Human Neuroscience © 2020 Bizzego, Balagtas and Esposito. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. application/pdf
institution Nanyang Technological University
building NTU Library
continent Asia
country Singapore
Singapore
content_provider NTU Library
collection DR-NTU
language English
topic Social sciences::Psychology
fNIRS
Signal Processing
spellingShingle Social sciences::Psychology
fNIRS
Signal Processing
Bizzego, Andrea
Balagtas, Jan Paolo M.
Esposito, Gianluca
Commentary : current status and issues regarding pre-processing of fnirs neuroimaging data : an investigation of diverse signal filtering methods within a general linear model framework
description We read with great interest the manuscript from Pinti et al. (2019), which aimed to shed a light on one of the main open topics in neuroimaging: the definition of reproducible and standardized pipelines for the preprocessing of functional Near InfraRed Spectroscopy (fNIRS) signals. In particular, Pinti and colleagues focused on the filtering step, evidencing a high heterogeneity of filter types adopted and settings that could undermine the reproducibility of the studies. Thanks to technological progress, a new generation of fNIRS devices can be used to collect brain activity signals within diverse settings and contexts (e.g., multi-modal and multi-person experimental designs; Azhari et al., 2019, 2020) and for diverse applications (e.g., to study the dynamics of the human brain network; Vergotte et al., 2017). The proliferation of use cases and applications brings up the possibility of fragmentation of the knowledge, unless the scientific community begins to adopt rigorous and standardized methods to allow comparability and reproducibility of the findings.
author2 School of Social Sciences
author_facet School of Social Sciences
Bizzego, Andrea
Balagtas, Jan Paolo M.
Esposito, Gianluca
format Article
author Bizzego, Andrea
Balagtas, Jan Paolo M.
Esposito, Gianluca
author_sort Bizzego, Andrea
title Commentary : current status and issues regarding pre-processing of fnirs neuroimaging data : an investigation of diverse signal filtering methods within a general linear model framework
title_short Commentary : current status and issues regarding pre-processing of fnirs neuroimaging data : an investigation of diverse signal filtering methods within a general linear model framework
title_full Commentary : current status and issues regarding pre-processing of fnirs neuroimaging data : an investigation of diverse signal filtering methods within a general linear model framework
title_fullStr Commentary : current status and issues regarding pre-processing of fnirs neuroimaging data : an investigation of diverse signal filtering methods within a general linear model framework
title_full_unstemmed Commentary : current status and issues regarding pre-processing of fnirs neuroimaging data : an investigation of diverse signal filtering methods within a general linear model framework
title_sort commentary : current status and issues regarding pre-processing of fnirs neuroimaging data : an investigation of diverse signal filtering methods within a general linear model framework
publishDate 2020
url https://hdl.handle.net/10356/144367
_version_ 1759855214167326720