Non-local means improves total-variation constrained photoacoustic image reconstruction

Photoacoustic/Optoacoustic tomography aims to reconstruct maps of the initial pressure rise induced by the absorption of light pulses in tissue. This reconstruction is an ill-conditioned and under-determined problem, when the data acquisition protocol involves limited detection positions. The aim of...

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Main Authors: Yalavarthy, Phaneendra K., Kalva, Sandeep Kumar, Pramanik, Manojit, Prakash, Jaya
Other Authors: School of Chemical and Biomedical Engineering
Format: Article
Language:English
Published: 2021
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Online Access:https://hdl.handle.net/10356/146419
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Institution: Nanyang Technological University
Language: English
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spelling sg-ntu-dr.10356-1464192023-12-29T06:54:37Z Non-local means improves total-variation constrained photoacoustic image reconstruction Yalavarthy, Phaneendra K. Kalva, Sandeep Kumar Pramanik, Manojit Prakash, Jaya School of Chemical and Biomedical Engineering Engineering::Bioengineering Deconvolution Image Reconstruction Photoacoustic/Optoacoustic tomography aims to reconstruct maps of the initial pressure rise induced by the absorption of light pulses in tissue. This reconstruction is an ill-conditioned and under-determined problem, when the data acquisition protocol involves limited detection positions. The aim of the work is to develop an inversion method which integrates denoising procedure within the iterative model-based reconstruction to improve quantitative performance of optoacoustic imaging. Among the model-based schemes, total-variation (TV) constrained reconstruction scheme is a popular approach. In this work, a two-step approach was proposed for improving the TV constrained optoacoustic inversion by adding a non-local means based filtering step within each TV iteration. Compared to TV-based reconstruction, inclusion of this non-local means step resulted in signal-to-noise ratio improvement of 2.5 dB in the reconstructed optoacoustic images. Accepted version Phaneendra K. Yalavarthy acknowledges the DST-ICPS cluster funding (T-851) for the data science program. Part of the work is supported through IFTAS-CDS Collaborative Laboratory of Data Science and Engineering. Jaya Prakash acknowledges the IISc Startup Grant as well as DBT-IYBA Program. 2021-02-16T08:21:57Z 2021-02-16T08:21:57Z 2021 Journal Article Yalavarthy, P. K., Kalva, S. K., Pramanik, M., & Prakash, J. (2021). Non-local means improves total-variation constrained photoacoustic image reconstruction. Journal of Biophotonics, 14(1), e202000191-. doi:10.1002/jbio.202000191 1864-0648 0000-0003-4810-352X 0000-0003-2865-5714 0000-0002-2375-154X https://hdl.handle.net/10356/146419 10.1002/jbio.202000191 33025761 2-s2.0-85094641219 1 14 e202000191 en Journal of Biophotonics This is the accepted version of the following article: Yalavarthy, P. K., Kalva, S. K., Pramanik, M., & Prakash, J. (2021). Non-local means improves total-variation constrained photoacoustic image reconstruction. Journal of Biophotonics, 14(1), e202000191-. doi:10.1002/jbio.202000191, which has been published in final form at https://doi.org/10.1002/jbio.202000191. This article may be used for non-commercial purposes in accordance with the Wiley Self-Archiving Policy [https://authorservices.wiley.com/authorresources/Journal-Authors/licensing/self-archiving.html]. application/pdf
institution Nanyang Technological University
building NTU Library
continent Asia
country Singapore
Singapore
content_provider NTU Library
collection DR-NTU
language English
topic Engineering::Bioengineering
Deconvolution
Image Reconstruction
spellingShingle Engineering::Bioengineering
Deconvolution
Image Reconstruction
Yalavarthy, Phaneendra K.
Kalva, Sandeep Kumar
Pramanik, Manojit
Prakash, Jaya
Non-local means improves total-variation constrained photoacoustic image reconstruction
description Photoacoustic/Optoacoustic tomography aims to reconstruct maps of the initial pressure rise induced by the absorption of light pulses in tissue. This reconstruction is an ill-conditioned and under-determined problem, when the data acquisition protocol involves limited detection positions. The aim of the work is to develop an inversion method which integrates denoising procedure within the iterative model-based reconstruction to improve quantitative performance of optoacoustic imaging. Among the model-based schemes, total-variation (TV) constrained reconstruction scheme is a popular approach. In this work, a two-step approach was proposed for improving the TV constrained optoacoustic inversion by adding a non-local means based filtering step within each TV iteration. Compared to TV-based reconstruction, inclusion of this non-local means step resulted in signal-to-noise ratio improvement of 2.5 dB in the reconstructed optoacoustic images.
author2 School of Chemical and Biomedical Engineering
author_facet School of Chemical and Biomedical Engineering
Yalavarthy, Phaneendra K.
Kalva, Sandeep Kumar
Pramanik, Manojit
Prakash, Jaya
format Article
author Yalavarthy, Phaneendra K.
Kalva, Sandeep Kumar
Pramanik, Manojit
Prakash, Jaya
author_sort Yalavarthy, Phaneendra K.
title Non-local means improves total-variation constrained photoacoustic image reconstruction
title_short Non-local means improves total-variation constrained photoacoustic image reconstruction
title_full Non-local means improves total-variation constrained photoacoustic image reconstruction
title_fullStr Non-local means improves total-variation constrained photoacoustic image reconstruction
title_full_unstemmed Non-local means improves total-variation constrained photoacoustic image reconstruction
title_sort non-local means improves total-variation constrained photoacoustic image reconstruction
publishDate 2021
url https://hdl.handle.net/10356/146419
_version_ 1787136820653326336