Machine learning-based pipeline for high accuracy bioparticle sizing
High accuracy measurement of size is essential in physical and biomedical sciences. Various sizing techniques have been widely used in sorting colloidal materials, analyzing bioparticles and monitoring the qualities of food and atmosphere. Most imaging-free methods such as light scattering measure t...
Saved in:
Main Authors: | , , , , , , , , , , , |
---|---|
Other Authors: | |
Format: | Article |
Language: | English |
Published: |
2021
|
Subjects: | |
Online Access: | https://hdl.handle.net/10356/151479 |
Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
Institution: | Nanyang Technological University |
Language: | English |
id |
sg-ntu-dr.10356-151479 |
---|---|
record_format |
dspace |
spelling |
sg-ntu-dr.10356-1514792021-06-18T09:10:20Z Machine learning-based pipeline for high accuracy bioparticle sizing Luo, Shaobo Zhang, Yi Nguyen, Kim Truc Feng, Shilun Shi, Yuzhi Liu, Yang Hutchinson, Paul Chierchia, Giovanni Talbot, Hugues Bourouina, Tarik Jiang, Xudong Liu, Ai Qun School of Electrical and Electronic Engineering School of Mechanical and Aerospace Engineering Nanyang Environment and Water Research Institute Engineering::Electrical and electronic engineering Optofluidics CMOS High accuracy measurement of size is essential in physical and biomedical sciences. Various sizing techniques have been widely used in sorting colloidal materials, analyzing bioparticles and monitoring the qualities of food and atmosphere. Most imaging-free methods such as light scattering measure the averaged size of particles and have difficulties in determining non-spherical particles. Imaging acquisition using camera is capable of observing individual nanoparticles in real time, but the accuracy is compromised by the image defocusing and instrumental calibration. In this work, a machine learning-based pipeline is developed to facilitate a high accuracy imaging-based particle sizing. The pipeline consists of an image segmentation module for cell identification and a machine learning model for accurate pixel-to-size conversion. The results manifest a significantly improved accuracy, showing great potential for a wide range of applications in environmental sensing, biomedical diagnostical, and material characterization. Ministry of Education (MOE) National Research Foundation (NRF) Published version This research was funded by the Singapore National Research Foundation under the Competitive Research Program (NRF-CRP13-2014-01), and Ministry of Education Tier 1 RG39/19. 2021-06-18T09:10:20Z 2021-06-18T09:10:20Z 2020 Journal Article Luo, S., Zhang, Y., Nguyen, K. T., Feng, S., Shi, Y., Liu, Y., Hutchinson, P., Chierchia, G., Talbot, H., Bourouina, T., Jiang, X. & Liu, A. Q. (2020). Machine learning-based pipeline for high accuracy bioparticle sizing. Micromachines, 11(12), 1-12. https://dx.doi.org/10.3390/mi11121084 2072-666X https://hdl.handle.net/10356/151479 10.3390/mi11121084 33297515 2-s2.0-85099199209 12 11 1 12 en Micromachines © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). application/pdf |
institution |
Nanyang Technological University |
building |
NTU Library |
continent |
Asia |
country |
Singapore Singapore |
content_provider |
NTU Library |
collection |
DR-NTU |
language |
English |
topic |
Engineering::Electrical and electronic engineering Optofluidics CMOS |
spellingShingle |
Engineering::Electrical and electronic engineering Optofluidics CMOS Luo, Shaobo Zhang, Yi Nguyen, Kim Truc Feng, Shilun Shi, Yuzhi Liu, Yang Hutchinson, Paul Chierchia, Giovanni Talbot, Hugues Bourouina, Tarik Jiang, Xudong Liu, Ai Qun Machine learning-based pipeline for high accuracy bioparticle sizing |
description |
High accuracy measurement of size is essential in physical and biomedical sciences. Various sizing techniques have been widely used in sorting colloidal materials, analyzing bioparticles and monitoring the qualities of food and atmosphere. Most imaging-free methods such as light scattering measure the averaged size of particles and have difficulties in determining non-spherical particles. Imaging acquisition using camera is capable of observing individual nanoparticles in real time, but the accuracy is compromised by the image defocusing and instrumental calibration. In this work, a machine learning-based pipeline is developed to facilitate a high accuracy imaging-based particle sizing. The pipeline consists of an image segmentation module for cell identification and a machine learning model for accurate pixel-to-size conversion. The results manifest a significantly improved accuracy, showing great potential for a wide range of applications in environmental sensing, biomedical diagnostical, and material characterization. |
author2 |
School of Electrical and Electronic Engineering |
author_facet |
School of Electrical and Electronic Engineering Luo, Shaobo Zhang, Yi Nguyen, Kim Truc Feng, Shilun Shi, Yuzhi Liu, Yang Hutchinson, Paul Chierchia, Giovanni Talbot, Hugues Bourouina, Tarik Jiang, Xudong Liu, Ai Qun |
format |
Article |
author |
Luo, Shaobo Zhang, Yi Nguyen, Kim Truc Feng, Shilun Shi, Yuzhi Liu, Yang Hutchinson, Paul Chierchia, Giovanni Talbot, Hugues Bourouina, Tarik Jiang, Xudong Liu, Ai Qun |
author_sort |
Luo, Shaobo |
title |
Machine learning-based pipeline for high accuracy bioparticle sizing |
title_short |
Machine learning-based pipeline for high accuracy bioparticle sizing |
title_full |
Machine learning-based pipeline for high accuracy bioparticle sizing |
title_fullStr |
Machine learning-based pipeline for high accuracy bioparticle sizing |
title_full_unstemmed |
Machine learning-based pipeline for high accuracy bioparticle sizing |
title_sort |
machine learning-based pipeline for high accuracy bioparticle sizing |
publishDate |
2021 |
url |
https://hdl.handle.net/10356/151479 |
_version_ |
1703971212637503488 |