Whence came these plants most foul? Phylogenomics and biogeography of Lowiaceae (Zingiberales)

Lowiaceae (order Zingiberales) is a small family of forest herbs in Southeast Asia. All species belong to the genus Orchidantha. They are known for possessing orchid-like flowers that are smelly, apparently mimicking dead animals, feces, or mushrooms. Little is known of the biogeographic patterns or...

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Main Authors: Niissalo, Matti A., Gardner, Elliot M., Khew, Gillian S., Šída, Otakar, Poulsen, Axel Dalberg, Leong-Škornicková, Jana
Other Authors: School of Biological Sciences
Format: Article
Language:English
Published: 2022
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Online Access:https://hdl.handle.net/10356/163181
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spelling sg-ntu-dr.10356-1631812023-02-28T17:12:25Z Whence came these plants most foul? Phylogenomics and biogeography of Lowiaceae (Zingiberales) Niissalo, Matti A. Gardner, Elliot M. Khew, Gillian S. Šída, Otakar Poulsen, Axel Dalberg Leong-Škornicková, Jana School of Biological Sciences Singapore Botanic Gardens Social sciences::Geography Biogeography Genome Size Lowiaceae (order Zingiberales) is a small family of forest herbs in Southeast Asia. All species belong to the genus Orchidantha. They are known for possessing orchid-like flowers that are smelly, apparently mimicking dead animals, feces, or mushrooms. Little is known of the biogeographic patterns or character evolution of the family. We sampled the family extensively, including many recently discovered species, and reconstructed the phylogeny of the family using HybSeq with Lowiaceae-specific RNA baits. Our phylogenetic reconstructions confirm that the family is most closely related to Strelitziaceae, and that species with dark, foul-smelling flowers form a grade in which a clade of species with paler flowers are embedded. The pale-flowered species produce a distinct odor, resembling edible mushrooms. Apart from a single species, the species from Borneo form a clade, and the same is true for Indochinese species. The remaining species form a more widespread clade. A biogeographic analysis shows that the distribution of Lowiaceae can explained by vicariance and gradual dispersal from a shared ancestral range of Borneo and Indochina. There is no evidence of long-distance dispersal, only a later extension in distribution to Peninsular Malaysia which coincides with the presence of a land bridge. Different directions of spread are possible, but none require long-distance dispersal. The results are consistent with the geological history of Southeast Asia. In particular, the relatively early isolation between Indochina and Borneo could be explained by the presence of a sea barrier that developed 10–15 MYA, and the continuous movement of plant species between Borneo and Peninsular Malaysia could be explained by a land bridge that existed until c. 5 MYA. The lack of an extensive land bridge with a suitable habitat may explain the absence of this genus from Sumatra and other Indonesian islands aside from Borneo. The strict reliance on a continuous habitat for the range expansion of Lowiaceae can be explained by their fruits and seeds, which lack obvious adaptations for long-distance dispersal. The inability to disperse to new areas may also explain why the extant species have very restricted distributions. National Parks Board Published version GK, MN, and JL-Š were supported by the National Parks Board. OŠ was financially supported by the Ministry of Culture of the Czech Republic (nos. 00023272, DKRVO 4.II.c). EG was supported by the United States National Science Foundation (DBI award no. 1711391). 2022-11-28T05:23:22Z 2022-11-28T05:23:22Z 2022 Journal Article Niissalo, M. A., Gardner, E. M., Khew, G. S., Šída, O., Poulsen, A. D. & Leong-Škornicková, J. (2022). Whence came these plants most foul? Phylogenomics and biogeography of Lowiaceae (Zingiberales). Frontiers in Ecology and Evolution, 9, 794977-. https://dx.doi.org/10.3389/fevo.2021.794977 2296-701X https://hdl.handle.net/10356/163181 10.3389/fevo.2021.794977 2-s2.0-85123182715 9 794977 en Frontiers in Ecology and Evolution © 2022 Niissalo, Gardner, Khew, Šída, Poulsen and Leong-Škorniˇcková. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. application/pdf
institution Nanyang Technological University
building NTU Library
continent Asia
country Singapore
Singapore
content_provider NTU Library
collection DR-NTU
language English
topic Social sciences::Geography
Biogeography
Genome Size
spellingShingle Social sciences::Geography
Biogeography
Genome Size
Niissalo, Matti A.
Gardner, Elliot M.
Khew, Gillian S.
Šída, Otakar
Poulsen, Axel Dalberg
Leong-Škornicková, Jana
Whence came these plants most foul? Phylogenomics and biogeography of Lowiaceae (Zingiberales)
description Lowiaceae (order Zingiberales) is a small family of forest herbs in Southeast Asia. All species belong to the genus Orchidantha. They are known for possessing orchid-like flowers that are smelly, apparently mimicking dead animals, feces, or mushrooms. Little is known of the biogeographic patterns or character evolution of the family. We sampled the family extensively, including many recently discovered species, and reconstructed the phylogeny of the family using HybSeq with Lowiaceae-specific RNA baits. Our phylogenetic reconstructions confirm that the family is most closely related to Strelitziaceae, and that species with dark, foul-smelling flowers form a grade in which a clade of species with paler flowers are embedded. The pale-flowered species produce a distinct odor, resembling edible mushrooms. Apart from a single species, the species from Borneo form a clade, and the same is true for Indochinese species. The remaining species form a more widespread clade. A biogeographic analysis shows that the distribution of Lowiaceae can explained by vicariance and gradual dispersal from a shared ancestral range of Borneo and Indochina. There is no evidence of long-distance dispersal, only a later extension in distribution to Peninsular Malaysia which coincides with the presence of a land bridge. Different directions of spread are possible, but none require long-distance dispersal. The results are consistent with the geological history of Southeast Asia. In particular, the relatively early isolation between Indochina and Borneo could be explained by the presence of a sea barrier that developed 10–15 MYA, and the continuous movement of plant species between Borneo and Peninsular Malaysia could be explained by a land bridge that existed until c. 5 MYA. The lack of an extensive land bridge with a suitable habitat may explain the absence of this genus from Sumatra and other Indonesian islands aside from Borneo. The strict reliance on a continuous habitat for the range expansion of Lowiaceae can be explained by their fruits and seeds, which lack obvious adaptations for long-distance dispersal. The inability to disperse to new areas may also explain why the extant species have very restricted distributions.
author2 School of Biological Sciences
author_facet School of Biological Sciences
Niissalo, Matti A.
Gardner, Elliot M.
Khew, Gillian S.
Šída, Otakar
Poulsen, Axel Dalberg
Leong-Škornicková, Jana
format Article
author Niissalo, Matti A.
Gardner, Elliot M.
Khew, Gillian S.
Šída, Otakar
Poulsen, Axel Dalberg
Leong-Škornicková, Jana
author_sort Niissalo, Matti A.
title Whence came these plants most foul? Phylogenomics and biogeography of Lowiaceae (Zingiberales)
title_short Whence came these plants most foul? Phylogenomics and biogeography of Lowiaceae (Zingiberales)
title_full Whence came these plants most foul? Phylogenomics and biogeography of Lowiaceae (Zingiberales)
title_fullStr Whence came these plants most foul? Phylogenomics and biogeography of Lowiaceae (Zingiberales)
title_full_unstemmed Whence came these plants most foul? Phylogenomics and biogeography of Lowiaceae (Zingiberales)
title_sort whence came these plants most foul? phylogenomics and biogeography of lowiaceae (zingiberales)
publishDate 2022
url https://hdl.handle.net/10356/163181
_version_ 1759857574046334976