Discovering optimal survival strategies for plankton
Diel vertical migration (DVM) is the migration cycle of zooplankton that came about as a form of adaptation to the environment. Studies done on DVM typically involve field observations or mathematical models to imitate DVM behavior. Field observations are typically very costly and time-consumi...
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sg-ntu-dr.10356-1668142023-05-13T16:52:02Z Discovering optimal survival strategies for plankton Foo, Chang Lin Marcos School of Mechanical and Aerospace Engineering marcos@ntu.edu.sg Engineering::Mathematics and analysis::Simulations Diel vertical migration (DVM) is the migration cycle of zooplankton that came about as a form of adaptation to the environment. Studies done on DVM typically involve field observations or mathematical models to imitate DVM behavior. Field observations are typically very costly and time-consuming due to the large time and spatial scale of DVM. As such, mathematical models are considered to be a more efficient approach. This project aims to develop a framework to model DVM and considered chemotaxis and negative phototaxis as the underlying movement patterns in DVM. A biased random walk model and a deep reinforcement learning (RL) approach were explored in this project and their relative performances were compared. The RL models were shown to have superior performance over the biased random walk, as the RL models were able to maximize the chemical gradient exposure while avoiding high light intensity exposure depending on the simulation’s time step. However, the RL approach requires more computational resources and time to train an effective model. Curriculum learning was then proposed to reduce the time taken to train these RL models. Finally, the problem designed in this project can be made more complex in further studies by considering more environmental conditions or introducing more complex physics to more accurately model the movement of planktonic organisms in water. Bachelor of Engineering (Aerospace Engineering) 2023-05-12T13:46:58Z 2023-05-12T13:46:58Z 2023 Final Year Project (FYP) Foo, C. L. (2023). Discovering optimal survival strategies for plankton. Final Year Project (FYP), Nanyang Technological University, Singapore. https://hdl.handle.net/10356/166814 https://hdl.handle.net/10356/166814 en application/pdf Nanyang Technological University |
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Engineering::Mathematics and analysis::Simulations Foo, Chang Lin Discovering optimal survival strategies for plankton |
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Diel vertical migration (DVM) is the migration cycle of zooplankton that came about as a form of
adaptation to the environment. Studies done on DVM typically involve field observations or
mathematical models to imitate DVM behavior. Field observations are typically very costly and
time-consuming due to the large time and spatial scale of DVM. As such, mathematical models
are considered to be a more efficient approach. This project aims to develop a framework to model
DVM and considered chemotaxis and negative phototaxis as the underlying movement patterns in
DVM. A biased random walk model and a deep reinforcement learning (RL) approach were
explored in this project and their relative performances were compared. The RL models were
shown to have superior performance over the biased random walk, as the RL models were able to
maximize the chemical gradient exposure while avoiding high light intensity exposure depending
on the simulation’s time step. However, the RL approach requires more computational resources
and time to train an effective model. Curriculum learning was then proposed to reduce the time
taken to train these RL models. Finally, the problem designed in this project can be made more
complex in further studies by considering more environmental conditions or introducing more
complex physics to more accurately model the movement of planktonic organisms in water. |
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Marcos |
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Marcos Foo, Chang Lin |
format |
Final Year Project |
author |
Foo, Chang Lin |
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Foo, Chang Lin |
title |
Discovering optimal survival strategies for plankton |
title_short |
Discovering optimal survival strategies for plankton |
title_full |
Discovering optimal survival strategies for plankton |
title_fullStr |
Discovering optimal survival strategies for plankton |
title_full_unstemmed |
Discovering optimal survival strategies for plankton |
title_sort |
discovering optimal survival strategies for plankton |
publisher |
Nanyang Technological University |
publishDate |
2023 |
url |
https://hdl.handle.net/10356/166814 |
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1770564031817449472 |