Discovering optimal survival strategies for plankton

Diel vertical migration (DVM) is the migration cycle of zooplankton that came about as a form of adaptation to the environment. Studies done on DVM typically involve field observations or mathematical models to imitate DVM behavior. Field observations are typically very costly and time-consumi...

Full description

Saved in:
Bibliographic Details
Main Author: Foo, Chang Lin
Other Authors: Marcos
Format: Final Year Project
Language:English
Published: Nanyang Technological University 2023
Subjects:
Online Access:https://hdl.handle.net/10356/166814
Tags: Add Tag
No Tags, Be the first to tag this record!
Institution: Nanyang Technological University
Language: English
id sg-ntu-dr.10356-166814
record_format dspace
spelling sg-ntu-dr.10356-1668142023-05-13T16:52:02Z Discovering optimal survival strategies for plankton Foo, Chang Lin Marcos School of Mechanical and Aerospace Engineering marcos@ntu.edu.sg Engineering::Mathematics and analysis::Simulations Diel vertical migration (DVM) is the migration cycle of zooplankton that came about as a form of adaptation to the environment. Studies done on DVM typically involve field observations or mathematical models to imitate DVM behavior. Field observations are typically very costly and time-consuming due to the large time and spatial scale of DVM. As such, mathematical models are considered to be a more efficient approach. This project aims to develop a framework to model DVM and considered chemotaxis and negative phototaxis as the underlying movement patterns in DVM. A biased random walk model and a deep reinforcement learning (RL) approach were explored in this project and their relative performances were compared. The RL models were shown to have superior performance over the biased random walk, as the RL models were able to maximize the chemical gradient exposure while avoiding high light intensity exposure depending on the simulation’s time step. However, the RL approach requires more computational resources and time to train an effective model. Curriculum learning was then proposed to reduce the time taken to train these RL models. Finally, the problem designed in this project can be made more complex in further studies by considering more environmental conditions or introducing more complex physics to more accurately model the movement of planktonic organisms in water. Bachelor of Engineering (Aerospace Engineering) 2023-05-12T13:46:58Z 2023-05-12T13:46:58Z 2023 Final Year Project (FYP) Foo, C. L. (2023). Discovering optimal survival strategies for plankton. Final Year Project (FYP), Nanyang Technological University, Singapore. https://hdl.handle.net/10356/166814 https://hdl.handle.net/10356/166814 en application/pdf Nanyang Technological University
institution Nanyang Technological University
building NTU Library
continent Asia
country Singapore
Singapore
content_provider NTU Library
collection DR-NTU
language English
topic Engineering::Mathematics and analysis::Simulations
spellingShingle Engineering::Mathematics and analysis::Simulations
Foo, Chang Lin
Discovering optimal survival strategies for plankton
description Diel vertical migration (DVM) is the migration cycle of zooplankton that came about as a form of adaptation to the environment. Studies done on DVM typically involve field observations or mathematical models to imitate DVM behavior. Field observations are typically very costly and time-consuming due to the large time and spatial scale of DVM. As such, mathematical models are considered to be a more efficient approach. This project aims to develop a framework to model DVM and considered chemotaxis and negative phototaxis as the underlying movement patterns in DVM. A biased random walk model and a deep reinforcement learning (RL) approach were explored in this project and their relative performances were compared. The RL models were shown to have superior performance over the biased random walk, as the RL models were able to maximize the chemical gradient exposure while avoiding high light intensity exposure depending on the simulation’s time step. However, the RL approach requires more computational resources and time to train an effective model. Curriculum learning was then proposed to reduce the time taken to train these RL models. Finally, the problem designed in this project can be made more complex in further studies by considering more environmental conditions or introducing more complex physics to more accurately model the movement of planktonic organisms in water.
author2 Marcos
author_facet Marcos
Foo, Chang Lin
format Final Year Project
author Foo, Chang Lin
author_sort Foo, Chang Lin
title Discovering optimal survival strategies for plankton
title_short Discovering optimal survival strategies for plankton
title_full Discovering optimal survival strategies for plankton
title_fullStr Discovering optimal survival strategies for plankton
title_full_unstemmed Discovering optimal survival strategies for plankton
title_sort discovering optimal survival strategies for plankton
publisher Nanyang Technological University
publishDate 2023
url https://hdl.handle.net/10356/166814
_version_ 1770564031817449472