Viewing biofilm formation through a multifocal lens of physics and biology
Recent studies on the formation, organisation and dynamics of biofilms highlight the interplay between physical forces and biological programs. Two complementary generalised pathways that explain the mechanisms driving biofilm formation have emerged. In the first pathway, where physical forces prece...
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sg-ntu-dr.10356-1711692023-10-16T15:32:41Z Viewing biofilm formation through a multifocal lens of physics and biology Kundukad, Binu Ho, James Chin Shing Mugunthan, Sudarsan Wong, Lan Li Rice, Scott A. Parikh, Atul N. Seviour, Thomas Hinks, Jamie Kjelleberg, Staffan School of Biological Sciences Singapore Centre for Environmental Life Sciences and Engineering (SCELSE) Institute for Digital Molecular Analytics and Science Science::Biological sciences Biofilms Extracellular Polymeric Substances Recent studies on the formation, organisation and dynamics of biofilms highlight the interplay between physical forces and biological programs. Two complementary generalised pathways that explain the mechanisms driving biofilm formation have emerged. In the first pathway, where physical forces precede the biological program, the initial expansion of cells leads to cell clustering or aggregation prior to the production of extracellular polymeric substances (EPS). The second pathway describes an initial biologically prompted production of EPS, which introduces new biophysical interactions within the EPS, such as by phase separation, macromolecular crowding, excluded volume interactions and intermolecular cross-linking. In practice, which of the two pathways is adopted is ultimately determined by the specificities of the biofilm and the local microenvironment, each leading to the formation of robust, viscoelastic biofilm. Within this framework, we further highlight here recent findings on the role of higher-order structures in matrix gelation and phase separation of EPS in promoting the clustering of bacteria. We assert that examining biofilms through the combined lens of physics and biology promises new and significant methodological and conceptual advancements in our understanding of biofilms. Ministry of Education (MOE) Nanyang Technological University National Research Foundation (NRF) Published version The authors acknowledge funding support to SCELSE from National Research Foundation and Ministry of Education, Singapore, Nanyang Technological University, Singapore, and National University of Singapore. 2023-10-16T06:34:15Z 2023-10-16T06:34:15Z 2023 Journal Article Kundukad, B., Ho, J. C. S., Mugunthan, S., Wong, L. L., Rice, S. A., Parikh, A. N., Seviour, T., Hinks, J. & Kjelleberg, S. (2023). Viewing biofilm formation through a multifocal lens of physics and biology. Microbiology Australia, 44(2), 69-74. https://dx.doi.org/10.1071/MA23021 1324-4272 https://hdl.handle.net/10356/171169 10.1071/MA23021 2-s2.0-85164240972 2 44 69 74 en Microbiology Australia © 2023 The Author(s) (or their employer(s)). Published by CSIRO Publishing on behalf of the ASM. This is an open access article distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License (CC BY-NC-ND). application/pdf |
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Science::Biological sciences Biofilms Extracellular Polymeric Substances Kundukad, Binu Ho, James Chin Shing Mugunthan, Sudarsan Wong, Lan Li Rice, Scott A. Parikh, Atul N. Seviour, Thomas Hinks, Jamie Kjelleberg, Staffan Viewing biofilm formation through a multifocal lens of physics and biology |
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Recent studies on the formation, organisation and dynamics of biofilms highlight the interplay between physical forces and biological programs. Two complementary generalised pathways that explain the mechanisms driving biofilm formation have emerged. In the first pathway, where physical forces precede the biological program, the initial expansion of cells leads to cell clustering or aggregation prior to the production of extracellular polymeric substances (EPS). The second pathway describes an initial biologically prompted production of EPS, which introduces new biophysical interactions within the EPS, such as by phase separation, macromolecular crowding, excluded volume interactions and intermolecular cross-linking. In practice, which of the two pathways is adopted is ultimately determined by the specificities of the biofilm and the local microenvironment, each leading to the formation of robust, viscoelastic biofilm. Within this framework, we further highlight here recent findings on the role of higher-order structures in matrix gelation and phase separation of EPS in promoting the clustering of bacteria. We assert that examining biofilms through the combined lens of physics and biology promises new and significant methodological and conceptual advancements in our understanding of biofilms. |
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School of Biological Sciences |
author_facet |
School of Biological Sciences Kundukad, Binu Ho, James Chin Shing Mugunthan, Sudarsan Wong, Lan Li Rice, Scott A. Parikh, Atul N. Seviour, Thomas Hinks, Jamie Kjelleberg, Staffan |
format |
Article |
author |
Kundukad, Binu Ho, James Chin Shing Mugunthan, Sudarsan Wong, Lan Li Rice, Scott A. Parikh, Atul N. Seviour, Thomas Hinks, Jamie Kjelleberg, Staffan |
author_sort |
Kundukad, Binu |
title |
Viewing biofilm formation through a multifocal lens of physics and biology |
title_short |
Viewing biofilm formation through a multifocal lens of physics and biology |
title_full |
Viewing biofilm formation through a multifocal lens of physics and biology |
title_fullStr |
Viewing biofilm formation through a multifocal lens of physics and biology |
title_full_unstemmed |
Viewing biofilm formation through a multifocal lens of physics and biology |
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viewing biofilm formation through a multifocal lens of physics and biology |
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2023 |
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https://hdl.handle.net/10356/171169 |
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1781793785492013056 |