Digitalised prediction of blue pigment content from Spirulina platensis: next-generation microalgae bio-molecule detection
The motive of this study is to predict the concentration of C-phycocyanin (CPC) from Spirulina platensis by adapting several colour models along with machine learning (ML) and deep learning (DL) techniques. Initially, three different culture mediums such as Zarrouk, BG-11, and AF6 were compared, and...
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sg-ntu-dr.10356-1808062024-10-28T04:50:13Z Digitalised prediction of blue pigment content from Spirulina platensis: next-generation microalgae bio-molecule detection Chong, Roy Jun Wei Khoo, Kuan Shiong Chew, Kit Wayne Ting, Huong-Yong Iwamoto, Koji Show, Pau Loke School of Chemistry, Chemical Engineering and Biotechnology Medicine, Health and Life Sciences Spirulina platensis C-phycocyanin The motive of this study is to predict the concentration of C-phycocyanin (CPC) from Spirulina platensis by adapting several colour models along with machine learning (ML) and deep learning (DL) techniques. Initially, three different culture mediums such as Zarrouk, BG-11, and AF6 were compared, and the BG-11 medium was chosen due to its overall best biomass growth, least amount of chemical usage, and CPC production. The performance of the convolutional neural network (CNN) without the input parameters of ‘Abs’ and ‘Day’ results in a higher R2 of 0.7269 as compared to both support vector machine (SVM) and artificial neural network (ANN) with R2 of 0.2725 and 0.2552, respectively. The absence of regularisation techniques has caused the scenario of model overfitting, showing results of R2Train = 0.9891 and R2Val = 0.5170 (without image augmentation) and R2Train = 0.9710 and R2Val = 0.5521 (including 20 % dropout but without image augmentation). Meanwhile, both SVM and ANN models were observed to show significantly high accuracy when including extra parameters of ‘Abs’ and ‘Day’ as compared to the CNN model with R2 of 0.9903 and 0.9827, respectively. We aim to establish a high precision and real-time assessment of microalgae biomolecule intelligent system that requires low cost, less time consumption, and is widely applicable, addressing the challenges associated with conventional microalgae quantification and identification. Pau Loke Show would like to acknowledge the Khalifa University (FSU-2024-001) with project reference number 8474000580. One of the authors (Kuan Shiong Khoo) would like to gratefully acknowledge the work supported and financially funded by National Science and Technology Council, Taiwan (Project number: 112-2222-E-155-005) and Department of Chemical Engineering and Material Science, Yuan Ze University, Taiwan under New Faculty Research Start-Up Fund Scheme (Project no: 303014-1 and 303014-2). 2024-10-28T04:50:13Z 2024-10-28T04:50:13Z 2024 Journal Article Chong, R. J. W., Khoo, K. S., Chew, K. W., Ting, H., Iwamoto, K. & Show, P. L. (2024). Digitalised prediction of blue pigment content from Spirulina platensis: next-generation microalgae bio-molecule detection. Algal Research, 83, 103642-. https://dx.doi.org/10.1016/j.algal.2024.103642 2211-9264 https://hdl.handle.net/10356/180806 10.1016/j.algal.2024.103642 2-s2.0-85204741766 83 103642 en Algal Research © 2024 Published by Elsevier B.V. All rights reserved. |
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Medicine, Health and Life Sciences Spirulina platensis C-phycocyanin Chong, Roy Jun Wei Khoo, Kuan Shiong Chew, Kit Wayne Ting, Huong-Yong Iwamoto, Koji Show, Pau Loke Digitalised prediction of blue pigment content from Spirulina platensis: next-generation microalgae bio-molecule detection |
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The motive of this study is to predict the concentration of C-phycocyanin (CPC) from Spirulina platensis by adapting several colour models along with machine learning (ML) and deep learning (DL) techniques. Initially, three different culture mediums such as Zarrouk, BG-11, and AF6 were compared, and the BG-11 medium was chosen due to its overall best biomass growth, least amount of chemical usage, and CPC production. The performance of the convolutional neural network (CNN) without the input parameters of ‘Abs’ and ‘Day’ results in a higher R2 of 0.7269 as compared to both support vector machine (SVM) and artificial neural network (ANN) with R2 of 0.2725 and 0.2552, respectively. The absence of regularisation techniques has caused the scenario of model overfitting, showing results of R2Train = 0.9891 and R2Val = 0.5170 (without image augmentation) and R2Train = 0.9710 and R2Val = 0.5521 (including 20 % dropout but without image augmentation). Meanwhile, both SVM and ANN models were observed to show significantly high accuracy when including extra parameters of ‘Abs’ and ‘Day’ as compared to the CNN model with R2 of 0.9903 and 0.9827, respectively. We aim to establish a high precision and real-time assessment of microalgae biomolecule intelligent system that requires low cost, less time consumption, and is widely applicable, addressing the challenges associated with conventional microalgae quantification and identification. |
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School of Chemistry, Chemical Engineering and Biotechnology |
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School of Chemistry, Chemical Engineering and Biotechnology Chong, Roy Jun Wei Khoo, Kuan Shiong Chew, Kit Wayne Ting, Huong-Yong Iwamoto, Koji Show, Pau Loke |
format |
Article |
author |
Chong, Roy Jun Wei Khoo, Kuan Shiong Chew, Kit Wayne Ting, Huong-Yong Iwamoto, Koji Show, Pau Loke |
author_sort |
Chong, Roy Jun Wei |
title |
Digitalised prediction of blue pigment content from Spirulina platensis: next-generation microalgae bio-molecule detection |
title_short |
Digitalised prediction of blue pigment content from Spirulina platensis: next-generation microalgae bio-molecule detection |
title_full |
Digitalised prediction of blue pigment content from Spirulina platensis: next-generation microalgae bio-molecule detection |
title_fullStr |
Digitalised prediction of blue pigment content from Spirulina platensis: next-generation microalgae bio-molecule detection |
title_full_unstemmed |
Digitalised prediction of blue pigment content from Spirulina platensis: next-generation microalgae bio-molecule detection |
title_sort |
digitalised prediction of blue pigment content from spirulina platensis: next-generation microalgae bio-molecule detection |
publishDate |
2024 |
url |
https://hdl.handle.net/10356/180806 |
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1814777728455409664 |