LSTrAP-denovo: automated generation of transcriptome atlases for eukaryotic species without genomes

• Main Authors: Lim, Peng Ken, Wang, Ruoxi, Mutwil, Marek
• Other Authors: School of Biological Sciences
• Format: Article
• Language: English
• Published: 2024
• Subjects: Medicine, Health and Life Sciences; Eukaryote; Gene expression profiling
• Online Access: https://hdl.handle.net/10356/181004
• Institution: Nanyang Technological University

Despite the abundance of species with transcriptomic data, a significant number of species still lack sequenced genomes, making it difficult to study gene function and expression in these organisms. While de novo transcriptome assembly can be used to assemble protein-coding transcripts from RNA-sequ...