Biodiversity studies of medical herb Epimedium Sagittatum (TCM herb 淫羊藿)

Epimedium Sagittatum is a wild-crafted perennial Traditional Chinese Medicine (TCM) herb mainly distributed in Southern China and is used to treat Ying/yang [阴阳] problems. 384 samples of 25 populations belonging to 3 sub-species of Epimedium Sagittatum from 21 counties/cities in 6 China provinces we...

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Main Author: Peh, William Wei Liang.
Other Authors: School of Biological Sciences
Format: Final Year Project
Language:English
Published: 2010
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Online Access:http://hdl.handle.net/10356/41818
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Institution: Nanyang Technological University
Language: English
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spelling sg-ntu-dr.10356-418182023-02-28T18:05:28Z Biodiversity studies of medical herb Epimedium Sagittatum (TCM herb 淫羊藿) Peh, William Wei Liang. School of Biological Sciences Temasek Life Sciences Laboratory Temasek Laboratories Hong Yan DRNTU::Science::Biological sciences::Botany Epimedium Sagittatum is a wild-crafted perennial Traditional Chinese Medicine (TCM) herb mainly distributed in Southern China and is used to treat Ying/yang [阴阳] problems. 384 samples of 25 populations belonging to 3 sub-species of Epimedium Sagittatum from 21 counties/cities in 6 China provinces were genotyped with 7 highly polymorphic Simple Sequence Repeat (SSR) loci. 239 alleles detected revealed 100.0% polymorphism with mean observed heterozygosity HO of 0.601 suggesting a high level of diversity. Mantel test (Regression value R2 of 0.055) found weak correlation between genetic distances and geographical distances among populations. AMOVA test for sub-species showed that 96% of total genetic variation was within traditionally classified subspecies and principle coordinate analysis (PCA) revealed no obvious clustering of subspecies, all indicating the lack of genetic basis for such classification. Phylogenetic tree of the populations based on Nei genetic identity was constructed. With mean genetic similarity of only 0.296, all the populations are distinct from each other. Such genetic divergence may underline phytochemical divergence, which was confirmed by the big variation of icarrin, the marker compound for Epimedium. Genetic similarity was not correlated with phytochemical similarity for icariin. Implications of this finding on quality control of Epimedium are discussed. Bachelor of Science in Biomedical Sciences 2010-08-13T03:33:20Z 2010-08-13T03:33:20Z 2010 2010 Final Year Project (FYP) http://hdl.handle.net/10356/41818 en Nanyang Technological University 31 p. application/pdf
institution Nanyang Technological University
building NTU Library
continent Asia
country Singapore
Singapore
content_provider NTU Library
collection DR-NTU
language English
topic DRNTU::Science::Biological sciences::Botany
spellingShingle DRNTU::Science::Biological sciences::Botany
Peh, William Wei Liang.
Biodiversity studies of medical herb Epimedium Sagittatum (TCM herb 淫羊藿)
description Epimedium Sagittatum is a wild-crafted perennial Traditional Chinese Medicine (TCM) herb mainly distributed in Southern China and is used to treat Ying/yang [阴阳] problems. 384 samples of 25 populations belonging to 3 sub-species of Epimedium Sagittatum from 21 counties/cities in 6 China provinces were genotyped with 7 highly polymorphic Simple Sequence Repeat (SSR) loci. 239 alleles detected revealed 100.0% polymorphism with mean observed heterozygosity HO of 0.601 suggesting a high level of diversity. Mantel test (Regression value R2 of 0.055) found weak correlation between genetic distances and geographical distances among populations. AMOVA test for sub-species showed that 96% of total genetic variation was within traditionally classified subspecies and principle coordinate analysis (PCA) revealed no obvious clustering of subspecies, all indicating the lack of genetic basis for such classification. Phylogenetic tree of the populations based on Nei genetic identity was constructed. With mean genetic similarity of only 0.296, all the populations are distinct from each other. Such genetic divergence may underline phytochemical divergence, which was confirmed by the big variation of icarrin, the marker compound for Epimedium. Genetic similarity was not correlated with phytochemical similarity for icariin. Implications of this finding on quality control of Epimedium are discussed.
author2 School of Biological Sciences
author_facet School of Biological Sciences
Peh, William Wei Liang.
format Final Year Project
author Peh, William Wei Liang.
author_sort Peh, William Wei Liang.
title Biodiversity studies of medical herb Epimedium Sagittatum (TCM herb 淫羊藿)
title_short Biodiversity studies of medical herb Epimedium Sagittatum (TCM herb 淫羊藿)
title_full Biodiversity studies of medical herb Epimedium Sagittatum (TCM herb 淫羊藿)
title_fullStr Biodiversity studies of medical herb Epimedium Sagittatum (TCM herb 淫羊藿)
title_full_unstemmed Biodiversity studies of medical herb Epimedium Sagittatum (TCM herb 淫羊藿)
title_sort biodiversity studies of medical herb epimedium sagittatum (tcm herb 淫羊藿)
publishDate 2010
url http://hdl.handle.net/10356/41818
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