Hierarchical approach to study water cluster in first-principles calculations

First-principles calculation plays a central role in computational physics and chemistry in studying the properties of molecular systems. Nevertheless, its high computational cost limits the capability to carry out first-principles calculations for exploring the potential energy surface of molecular...

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Main Author: Nguyen, Quoc Chinh
Other Authors: Kuo Jer-Lai
Format: Theses and Dissertations
Language:English
Published: 2010
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Online Access:https://hdl.handle.net/10356/42531
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Institution: Nanyang Technological University
Language: English
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spelling sg-ntu-dr.10356-425312023-02-28T23:56:51Z Hierarchical approach to study water cluster in first-principles calculations Nguyen, Quoc Chinh Kuo Jer-Lai School of Physical and Mathematical Sciences DRNTU::Engineering::Materials::Nanostructured materials First-principles calculation plays a central role in computational physics and chemistry in studying the properties of molecular systems. Nevertheless, its high computational cost limits the capability to carry out first-principles calculations for exploring the potential energy surface of molecular systems. In this work, a hierarchical method has been proposed to handle this issue in which we combine the semi-empirical methods and first-principles calculation in order to reduce the computational demand. The proposed hierarchical method has been applied to study water clusters. The microscopic structures and properties of water clusters have attracted interest of theoreticians because they are extremely difficult to be revealed in experiments. In our studies, the potential energy landscape of protonated (H + (H2O)n ), deprotonated (OH – (H2O)n ) and neutral ((H2O)n ) water clusters were thoroughly explored at quantum chemistry level. The distinct configurational isomers of different kinds of water clusters were uncovered and archived systematically by using a so-called archival memetic algorithm. The optimized geometries and relative stabilities of each system were analyzed afterward. For studies on thermodynamics and structural transitions, harmonic superposition approximation has been used to investigate the thermodynamics at both empirical and first-principles levels. The accuracy of harmonic superposition approximation has been tested by comparing the results with the ones predicted by Monte Carlo simulations. The finite temperature effects, the structural transitions as well as the thermodynamic profile of each kind of water for different sizes have been investigated systematically. For bridging the gap between theory and experiment as well as testing the accuracy of the simulation results, the vibrational spectra were simulated based on the calculated thermodynamic properties. The vibrational spectra were subsequently compared with recent experimental results. In addition, the effects of zero-point energy correction on the relative stabilities, thermodynamic properties and vibrational spectra of each system were discussed throughout the studies. Last but not least, we reported the details on the development of the potential models for protonated hydrogen fluoride and deprotonated water clusters in order to extend the current work to other molecular systems and also to improve the efficiency of the hierarchical approach for our future studies. DOCTOR OF PHILOSOPHY (SPMS) 2010-12-30T03:00:07Z 2010-12-30T03:00:07Z 2010 2010 Thesis Nguyen, Q. C. (2010). Hierarchical approach to study water cluster in first-principles calculations. Doctoral thesis, Nanyang Technological University, Singapore. https://hdl.handle.net/10356/42531 10.32657/10356/42531 en 149 p. application/pdf
institution Nanyang Technological University
building NTU Library
continent Asia
country Singapore
Singapore
content_provider NTU Library
collection DR-NTU
language English
topic DRNTU::Engineering::Materials::Nanostructured materials
spellingShingle DRNTU::Engineering::Materials::Nanostructured materials
Nguyen, Quoc Chinh
Hierarchical approach to study water cluster in first-principles calculations
description First-principles calculation plays a central role in computational physics and chemistry in studying the properties of molecular systems. Nevertheless, its high computational cost limits the capability to carry out first-principles calculations for exploring the potential energy surface of molecular systems. In this work, a hierarchical method has been proposed to handle this issue in which we combine the semi-empirical methods and first-principles calculation in order to reduce the computational demand. The proposed hierarchical method has been applied to study water clusters. The microscopic structures and properties of water clusters have attracted interest of theoreticians because they are extremely difficult to be revealed in experiments. In our studies, the potential energy landscape of protonated (H + (H2O)n ), deprotonated (OH – (H2O)n ) and neutral ((H2O)n ) water clusters were thoroughly explored at quantum chemistry level. The distinct configurational isomers of different kinds of water clusters were uncovered and archived systematically by using a so-called archival memetic algorithm. The optimized geometries and relative stabilities of each system were analyzed afterward. For studies on thermodynamics and structural transitions, harmonic superposition approximation has been used to investigate the thermodynamics at both empirical and first-principles levels. The accuracy of harmonic superposition approximation has been tested by comparing the results with the ones predicted by Monte Carlo simulations. The finite temperature effects, the structural transitions as well as the thermodynamic profile of each kind of water for different sizes have been investigated systematically. For bridging the gap between theory and experiment as well as testing the accuracy of the simulation results, the vibrational spectra were simulated based on the calculated thermodynamic properties. The vibrational spectra were subsequently compared with recent experimental results. In addition, the effects of zero-point energy correction on the relative stabilities, thermodynamic properties and vibrational spectra of each system were discussed throughout the studies. Last but not least, we reported the details on the development of the potential models for protonated hydrogen fluoride and deprotonated water clusters in order to extend the current work to other molecular systems and also to improve the efficiency of the hierarchical approach for our future studies.
author2 Kuo Jer-Lai
author_facet Kuo Jer-Lai
Nguyen, Quoc Chinh
format Theses and Dissertations
author Nguyen, Quoc Chinh
author_sort Nguyen, Quoc Chinh
title Hierarchical approach to study water cluster in first-principles calculations
title_short Hierarchical approach to study water cluster in first-principles calculations
title_full Hierarchical approach to study water cluster in first-principles calculations
title_fullStr Hierarchical approach to study water cluster in first-principles calculations
title_full_unstemmed Hierarchical approach to study water cluster in first-principles calculations
title_sort hierarchical approach to study water cluster in first-principles calculations
publishDate 2010
url https://hdl.handle.net/10356/42531
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