Hierarchical approach to study water cluster in first-principles calculations
First-principles calculation plays a central role in computational physics and chemistry in studying the properties of molecular systems. Nevertheless, its high computational cost limits the capability to carry out first-principles calculations for exploring the potential energy surface of molecular...
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sg-ntu-dr.10356-425312023-02-28T23:56:51Z Hierarchical approach to study water cluster in first-principles calculations Nguyen, Quoc Chinh Kuo Jer-Lai School of Physical and Mathematical Sciences DRNTU::Engineering::Materials::Nanostructured materials First-principles calculation plays a central role in computational physics and chemistry in studying the properties of molecular systems. Nevertheless, its high computational cost limits the capability to carry out first-principles calculations for exploring the potential energy surface of molecular systems. In this work, a hierarchical method has been proposed to handle this issue in which we combine the semi-empirical methods and first-principles calculation in order to reduce the computational demand. The proposed hierarchical method has been applied to study water clusters. The microscopic structures and properties of water clusters have attracted interest of theoreticians because they are extremely difficult to be revealed in experiments. In our studies, the potential energy landscape of protonated (H + (H2O)n ), deprotonated (OH – (H2O)n ) and neutral ((H2O)n ) water clusters were thoroughly explored at quantum chemistry level. The distinct configurational isomers of different kinds of water clusters were uncovered and archived systematically by using a so-called archival memetic algorithm. The optimized geometries and relative stabilities of each system were analyzed afterward. For studies on thermodynamics and structural transitions, harmonic superposition approximation has been used to investigate the thermodynamics at both empirical and first-principles levels. The accuracy of harmonic superposition approximation has been tested by comparing the results with the ones predicted by Monte Carlo simulations. The finite temperature effects, the structural transitions as well as the thermodynamic profile of each kind of water for different sizes have been investigated systematically. For bridging the gap between theory and experiment as well as testing the accuracy of the simulation results, the vibrational spectra were simulated based on the calculated thermodynamic properties. The vibrational spectra were subsequently compared with recent experimental results. In addition, the effects of zero-point energy correction on the relative stabilities, thermodynamic properties and vibrational spectra of each system were discussed throughout the studies. Last but not least, we reported the details on the development of the potential models for protonated hydrogen fluoride and deprotonated water clusters in order to extend the current work to other molecular systems and also to improve the efficiency of the hierarchical approach for our future studies. DOCTOR OF PHILOSOPHY (SPMS) 2010-12-30T03:00:07Z 2010-12-30T03:00:07Z 2010 2010 Thesis Nguyen, Q. C. (2010). Hierarchical approach to study water cluster in first-principles calculations. Doctoral thesis, Nanyang Technological University, Singapore. https://hdl.handle.net/10356/42531 10.32657/10356/42531 en 149 p. application/pdf |
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DRNTU::Engineering::Materials::Nanostructured materials Nguyen, Quoc Chinh Hierarchical approach to study water cluster in first-principles calculations |
description |
First-principles calculation plays a central role in computational physics and
chemistry in studying the properties of molecular systems. Nevertheless, its high
computational cost limits the capability to carry out first-principles calculations
for exploring the potential energy surface of molecular systems. In this work, a
hierarchical method has been proposed to handle this issue in which we combine
the semi-empirical methods and first-principles calculation in order to reduce the
computational demand.
The proposed hierarchical method has been applied to study water clusters.
The microscopic structures and properties of water clusters have attracted interest
of theoreticians because they are extremely difficult to be revealed in experiments.
In our studies, the potential energy landscape of protonated (H +
(H2O)n
),
deprotonated (OH –
(H2O)n
) and neutral ((H2O)n
) water clusters were thoroughly
explored at quantum chemistry level. The distinct configurational isomers of different
kinds of water clusters were uncovered and archived systematically by using
a so-called archival memetic algorithm. The optimized geometries and relative
stabilities of each system were analyzed afterward.
For studies on thermodynamics and structural transitions, harmonic superposition
approximation has been used to investigate the thermodynamics at both
empirical and first-principles levels. The accuracy of harmonic superposition approximation
has been tested by comparing the results with the ones predicted by
Monte Carlo simulations. The finite temperature effects, the structural transitions
as well as the thermodynamic profile of each kind of water for different sizes have
been investigated systematically. For bridging the gap between theory and experiment
as well as testing the accuracy of the simulation results, the vibrational
spectra were simulated based on the calculated thermodynamic properties. The
vibrational spectra were subsequently compared with recent experimental results.
In addition, the effects of zero-point energy correction on the relative stabilities,
thermodynamic properties and vibrational spectra of each system were discussed
throughout the studies.
Last but not least, we reported the details on the development of the potential
models for protonated hydrogen fluoride and deprotonated water clusters in order
to extend the current work to other molecular systems and also to improve the
efficiency of the hierarchical approach for our future studies. |
author2 |
Kuo Jer-Lai |
author_facet |
Kuo Jer-Lai Nguyen, Quoc Chinh |
format |
Theses and Dissertations |
author |
Nguyen, Quoc Chinh |
author_sort |
Nguyen, Quoc Chinh |
title |
Hierarchical approach to study water cluster in first-principles calculations |
title_short |
Hierarchical approach to study water cluster in first-principles calculations |
title_full |
Hierarchical approach to study water cluster in first-principles calculations |
title_fullStr |
Hierarchical approach to study water cluster in first-principles calculations |
title_full_unstemmed |
Hierarchical approach to study water cluster in first-principles calculations |
title_sort |
hierarchical approach to study water cluster in first-principles calculations |
publishDate |
2010 |
url |
https://hdl.handle.net/10356/42531 |
_version_ |
1759857665865940992 |