Functional analysis of a conserved nuage/piRNA pathway gene, tapas.

Piwi-interacting RNAs (piRNAs) have been implicated in defending the germline genome against the deleterious retroelements. Most of the piRNA pathway components have been shown to localize to the nuage, a unique perinuclear structure found in the animal germlines. Recently, a tudor domain protein Te...

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Main Author: Or, Yu Zuan.
Other Authors: Kristen Elizabeth Sadler
Format: Final Year Project
Language:English
Published: 2011
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Online Access:http://hdl.handle.net/10356/45260
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Institution: Nanyang Technological University
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spelling sg-ntu-dr.10356-452602023-02-28T18:04:30Z Functional analysis of a conserved nuage/piRNA pathway gene, tapas. Or, Yu Zuan. Kristen Elizabeth Sadler School of Biological Sciences Temasek Laboratories DRNTU::Science::Biological sciences::Genetics Piwi-interacting RNAs (piRNAs) have been implicated in defending the germline genome against the deleterious retroelements. Most of the piRNA pathway components have been shown to localize to the nuage, a unique perinuclear structure found in the animal germlines. Recently, a tudor domain protein Tejas that localizes to the nuage, has been reported to be involved in the germline piRNA pathway in Drosophila. Later, a homolog of Tejas, Tapas, was also found to be functioning in the piRNA pathway and localize to the nuage in Drosophila. Here, I report the characterization of Tapas for its role in the piRNA pathway. I show that tapas is involved in the hierarchical assembly of nuage: the proper localization of Vasa, Spindle-E, Tejas, Aubergine, Krimper, Argonaute 3 and Maelstrom to the nuage depends on tapas, and localization of Tapas is independent of any of the known nuage components. These results suggest that tapas probably functions upstream in the hierarchical assembly. Further, I found that Tapas physically interacts with some of the piRNA pathway components such as Aubergine, Argonaute3, Vasa, Tejas and Spindle-E. These results imply that Tapas probably aids in the formation of macromolecular complex at the perinuclear region, supporting the idea that piRNA components form a macrocomplex or sub-complexes at the perinuclear nuage by being engaged in piRNAs production. Bachelor of Science in Biological Sciences 2011-06-10T06:04:14Z 2011-06-10T06:04:14Z 2011 2011 Final Year Project (FYP) http://hdl.handle.net/10356/45260 en Nanyang Technological University 30 p. application/pdf
institution Nanyang Technological University
building NTU Library
continent Asia
country Singapore
Singapore
content_provider NTU Library
collection DR-NTU
language English
topic DRNTU::Science::Biological sciences::Genetics
spellingShingle DRNTU::Science::Biological sciences::Genetics
Or, Yu Zuan.
Functional analysis of a conserved nuage/piRNA pathway gene, tapas.
description Piwi-interacting RNAs (piRNAs) have been implicated in defending the germline genome against the deleterious retroelements. Most of the piRNA pathway components have been shown to localize to the nuage, a unique perinuclear structure found in the animal germlines. Recently, a tudor domain protein Tejas that localizes to the nuage, has been reported to be involved in the germline piRNA pathway in Drosophila. Later, a homolog of Tejas, Tapas, was also found to be functioning in the piRNA pathway and localize to the nuage in Drosophila. Here, I report the characterization of Tapas for its role in the piRNA pathway. I show that tapas is involved in the hierarchical assembly of nuage: the proper localization of Vasa, Spindle-E, Tejas, Aubergine, Krimper, Argonaute 3 and Maelstrom to the nuage depends on tapas, and localization of Tapas is independent of any of the known nuage components. These results suggest that tapas probably functions upstream in the hierarchical assembly. Further, I found that Tapas physically interacts with some of the piRNA pathway components such as Aubergine, Argonaute3, Vasa, Tejas and Spindle-E. These results imply that Tapas probably aids in the formation of macromolecular complex at the perinuclear region, supporting the idea that piRNA components form a macrocomplex or sub-complexes at the perinuclear nuage by being engaged in piRNAs production.
author2 Kristen Elizabeth Sadler
author_facet Kristen Elizabeth Sadler
Or, Yu Zuan.
format Final Year Project
author Or, Yu Zuan.
author_sort Or, Yu Zuan.
title Functional analysis of a conserved nuage/piRNA pathway gene, tapas.
title_short Functional analysis of a conserved nuage/piRNA pathway gene, tapas.
title_full Functional analysis of a conserved nuage/piRNA pathway gene, tapas.
title_fullStr Functional analysis of a conserved nuage/piRNA pathway gene, tapas.
title_full_unstemmed Functional analysis of a conserved nuage/piRNA pathway gene, tapas.
title_sort functional analysis of a conserved nuage/pirna pathway gene, tapas.
publishDate 2011
url http://hdl.handle.net/10356/45260
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