Discovery of stabilized functional mutants of human aquaporin 1

Aquaporins (AQPs) are essential water channel proteins found in the cell membranes of all forms of life. In this project, a random mutagenesis library for human aquaporin 1 (hAQP1) is generated and screened for functional mutants. We aim to outline the minimum requirements for effective water transp...

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Main Author: Soh, Miao Yi
Other Authors: Jaume Torres
Format: Final Year Project
Language:English
Published: 2016
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Online Access:http://hdl.handle.net/10356/67355
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Institution: Nanyang Technological University
Language: English
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spelling sg-ntu-dr.10356-673552023-02-28T18:02:32Z Discovery of stabilized functional mutants of human aquaporin 1 Soh, Miao Yi Jaume Torres School of Biological Sciences DRNTU::Science::Biological sciences Aquaporins (AQPs) are essential water channel proteins found in the cell membranes of all forms of life. In this project, a random mutagenesis library for human aquaporin 1 (hAQP1) is generated and screened for functional mutants. We aim to outline the minimum requirements for effective water transport through mapping of random mutations onto its monomeric structure. The techniques used to generate the library were error-prone polymerase chain reaction (epPCR) which uses Mutazyme II DNA Polymerase to introduce errors while amplifying the target AQP1 gene, followed by Megaprimer PCR of Whole Plasmid (MEGAWHOP) to clone the mutated AQP1 genes into plasmid vectors. A cell-based freeze-thaw functionality assay that was developed by the lab was conducted on yeast Saccharomyces cerevisiae cells transformed with the plasmids to identify the functional mutants, i.e., mutants that express the mutated AQP1 protein that would allow them to exhibit a protective effect in response to rapid freezing. ~ 5% of mutants from a total of 2816 screened from thirty-three 96-well plates were identified after a series of initial and verification screens. In future, we hope to characterize these mutants for increased stability as they may be useful in structural studies, drug discovery in human cancers related to AQP1 overexpression as well as in biotechnological applications, such as water purification, in particular. Bachelor of Science in Biological Sciences 2016-05-16T03:08:31Z 2016-05-16T03:08:31Z 2016 Final Year Project (FYP) http://hdl.handle.net/10356/67355 en Nanyang Technological University 34 p. application/pdf
institution Nanyang Technological University
building NTU Library
continent Asia
country Singapore
Singapore
content_provider NTU Library
collection DR-NTU
language English
topic DRNTU::Science::Biological sciences
spellingShingle DRNTU::Science::Biological sciences
Soh, Miao Yi
Discovery of stabilized functional mutants of human aquaporin 1
description Aquaporins (AQPs) are essential water channel proteins found in the cell membranes of all forms of life. In this project, a random mutagenesis library for human aquaporin 1 (hAQP1) is generated and screened for functional mutants. We aim to outline the minimum requirements for effective water transport through mapping of random mutations onto its monomeric structure. The techniques used to generate the library were error-prone polymerase chain reaction (epPCR) which uses Mutazyme II DNA Polymerase to introduce errors while amplifying the target AQP1 gene, followed by Megaprimer PCR of Whole Plasmid (MEGAWHOP) to clone the mutated AQP1 genes into plasmid vectors. A cell-based freeze-thaw functionality assay that was developed by the lab was conducted on yeast Saccharomyces cerevisiae cells transformed with the plasmids to identify the functional mutants, i.e., mutants that express the mutated AQP1 protein that would allow them to exhibit a protective effect in response to rapid freezing. ~ 5% of mutants from a total of 2816 screened from thirty-three 96-well plates were identified after a series of initial and verification screens. In future, we hope to characterize these mutants for increased stability as they may be useful in structural studies, drug discovery in human cancers related to AQP1 overexpression as well as in biotechnological applications, such as water purification, in particular.
author2 Jaume Torres
author_facet Jaume Torres
Soh, Miao Yi
format Final Year Project
author Soh, Miao Yi
author_sort Soh, Miao Yi
title Discovery of stabilized functional mutants of human aquaporin 1
title_short Discovery of stabilized functional mutants of human aquaporin 1
title_full Discovery of stabilized functional mutants of human aquaporin 1
title_fullStr Discovery of stabilized functional mutants of human aquaporin 1
title_full_unstemmed Discovery of stabilized functional mutants of human aquaporin 1
title_sort discovery of stabilized functional mutants of human aquaporin 1
publishDate 2016
url http://hdl.handle.net/10356/67355
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