Construction of novel small-molecule probes for real-time visualization of proteolytic enzyme functions

Proteolytic activities have received considerable attention given their vital roles in protein activation and degradation, which have been considered as extremely important pharmaceutical targets in the development of drugs and inhibitors for the treatment of cancer, bacterial or virus infection, an...

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Main Author: Mu, Jing
Other Authors: Xing Bengang
Format: Theses and Dissertations
Language:English
Published: 2017
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Online Access:http://hdl.handle.net/10356/69582
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Institution: Nanyang Technological University
Language: English
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spelling sg-ntu-dr.10356-695822023-02-28T23:41:59Z Construction of novel small-molecule probes for real-time visualization of proteolytic enzyme functions Mu, Jing Xing Bengang School of Physical and Mathematical Sciences DRNTU::Science::Medicine::Biosensors Proteolytic activities have received considerable attention given their vital roles in protein activation and degradation, which have been considered as extremely important pharmaceutical targets in the development of drugs and inhibitors for the treatment of cancer, bacterial or virus infection, and neurological disorders. Therefore, developing sensitive and accurate platforms to evaluate protease activities is necessary and critical in both scientific and biomedical areas. Fluorescent imaging has been extensively used in direct and non-invasive protein visualization, facilitating the study of protein localization and protein-protein interactions in living cells and organisms. Commonly used strategies are based on genetically encoded fluorescent proteins or tags into the protein of interest (POI). However, such genetic manipulations and in vitro assays fail to reflect the dynamic protease activities in living systems. Moreover, genetic fusion of fluorescent protein and tag probing labeling methods possibly perturb protein functions and thus affect cell physiology. Therefore, novel and sensitive platforms capable of real-time monitoring proteolytic activities and functions, especially in the pathological states are highly desired. In this dissertation, by taking the advantages of Förster Resonance Energy Transfer (FRET)-based small-molecule probes in the simplicity, sensitivity and amplified signal generation, the author attempted to develop a series of novel probes to visualize proteases activities at specific sites or organelles. In detail, the author firstly presents a simple and convenient method to visualize cell-surface proteolytic activities in living cells and tissues. The developed probe could be specifically cleaved by the membrane-associated furin-like enzymes, thereby recovering the fluorescence signals on the membrane of furin-expressed cells (Chapter 2). Subsequently, the proteolytic activities were visualized in single cell and the more detailed physical processes were investigated in chapter 3. In order to improve the diagnostic precision and specificity at the tumor microenvironment, a series of stimuli-responsive probes for selectively imaging furin-like enzyme activities are constructed. By using the optimal property of constructed photocaged probe, membrane-localized and endosome-localized proteolytic activities in living cells are achieved respectively, which presented great potentials for dynamically monitoring the furin-mediated processing of pathogens, virus or toxins at different sorting compartment. ​Doctor of Philosophy (SPMS) 2017-02-23T01:40:11Z 2017-02-23T01:40:11Z 2017 Thesis Mu, J. (2017). Construction of novel small-molecule probes for real-time visualization of proteolytic enzyme functions. Doctoral thesis, Nanyang Technological University, Singapore. http://hdl.handle.net/10356/69582 10.32657/10356/69582 en 151 p. application/pdf
institution Nanyang Technological University
building NTU Library
continent Asia
country Singapore
Singapore
content_provider NTU Library
collection DR-NTU
language English
topic DRNTU::Science::Medicine::Biosensors
spellingShingle DRNTU::Science::Medicine::Biosensors
Mu, Jing
Construction of novel small-molecule probes for real-time visualization of proteolytic enzyme functions
description Proteolytic activities have received considerable attention given their vital roles in protein activation and degradation, which have been considered as extremely important pharmaceutical targets in the development of drugs and inhibitors for the treatment of cancer, bacterial or virus infection, and neurological disorders. Therefore, developing sensitive and accurate platforms to evaluate protease activities is necessary and critical in both scientific and biomedical areas. Fluorescent imaging has been extensively used in direct and non-invasive protein visualization, facilitating the study of protein localization and protein-protein interactions in living cells and organisms. Commonly used strategies are based on genetically encoded fluorescent proteins or tags into the protein of interest (POI). However, such genetic manipulations and in vitro assays fail to reflect the dynamic protease activities in living systems. Moreover, genetic fusion of fluorescent protein and tag probing labeling methods possibly perturb protein functions and thus affect cell physiology. Therefore, novel and sensitive platforms capable of real-time monitoring proteolytic activities and functions, especially in the pathological states are highly desired. In this dissertation, by taking the advantages of Förster Resonance Energy Transfer (FRET)-based small-molecule probes in the simplicity, sensitivity and amplified signal generation, the author attempted to develop a series of novel probes to visualize proteases activities at specific sites or organelles. In detail, the author firstly presents a simple and convenient method to visualize cell-surface proteolytic activities in living cells and tissues. The developed probe could be specifically cleaved by the membrane-associated furin-like enzymes, thereby recovering the fluorescence signals on the membrane of furin-expressed cells (Chapter 2). Subsequently, the proteolytic activities were visualized in single cell and the more detailed physical processes were investigated in chapter 3. In order to improve the diagnostic precision and specificity at the tumor microenvironment, a series of stimuli-responsive probes for selectively imaging furin-like enzyme activities are constructed. By using the optimal property of constructed photocaged probe, membrane-localized and endosome-localized proteolytic activities in living cells are achieved respectively, which presented great potentials for dynamically monitoring the furin-mediated processing of pathogens, virus or toxins at different sorting compartment.
author2 Xing Bengang
author_facet Xing Bengang
Mu, Jing
format Theses and Dissertations
author Mu, Jing
author_sort Mu, Jing
title Construction of novel small-molecule probes for real-time visualization of proteolytic enzyme functions
title_short Construction of novel small-molecule probes for real-time visualization of proteolytic enzyme functions
title_full Construction of novel small-molecule probes for real-time visualization of proteolytic enzyme functions
title_fullStr Construction of novel small-molecule probes for real-time visualization of proteolytic enzyme functions
title_full_unstemmed Construction of novel small-molecule probes for real-time visualization of proteolytic enzyme functions
title_sort construction of novel small-molecule probes for real-time visualization of proteolytic enzyme functions
publishDate 2017
url http://hdl.handle.net/10356/69582
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