Glass transition behaviour In a voronoi model of cell tissues

In this final year project, we characterize the confluent polydisperse Voronoi model in the context of the glass transition. The Voronoi model is useful as a phenomenological approximation to the behaviour of real epithelial cells. Molecular dynamics simulations are carried out with temperature as...

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Main Author: Loh, Leon Yeong Wei
Other Authors: Pica Ciamarra Massimo
Format: Final Year Project
Language:English
Published: 2018
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Online Access:http://hdl.handle.net/10356/74107
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Institution: Nanyang Technological University
Language: English
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spelling sg-ntu-dr.10356-741072023-02-28T23:19:16Z Glass transition behaviour In a voronoi model of cell tissues Loh, Leon Yeong Wei Pica Ciamarra Massimo School of Physical and Mathematical Sciences DRNTU::Science::Physics In this final year project, we characterize the confluent polydisperse Voronoi model in the context of the glass transition. The Voronoi model is useful as a phenomenological approximation to the behaviour of real epithelial cells. Molecular dynamics simulations are carried out with temperature as a varying parameter and the preferred target shape index as a control parameter. This allows one to study the static and dynamical statistical properties in the temperature regime where mode-coupling theory is dominant. Both the dynamic and hexatic correlation lengths are found to have a negative relation with temperature. In contrast, the fragility of the polydisperse Voronoi model is demonstrated to be strong and independent of the preferred target shape index. A strong fragility corresponds to non-increasing potential energy barriers present within Goldstein's energy landscape. Finally, other measures unique only to the Voronoi model are carried out. The area and perimeter auto-correlation functions confirm ergodicity. An unexpected behaviour in the area radial correlation function might justify further investigations. Bachelor of Science in Physics 2018-04-25T08:42:47Z 2018-04-25T08:42:47Z 2018 Final Year Project (FYP) http://hdl.handle.net/10356/74107 en 100 p. application/pdf
institution Nanyang Technological University
building NTU Library
continent Asia
country Singapore
Singapore
content_provider NTU Library
collection DR-NTU
language English
topic DRNTU::Science::Physics
spellingShingle DRNTU::Science::Physics
Loh, Leon Yeong Wei
Glass transition behaviour In a voronoi model of cell tissues
description In this final year project, we characterize the confluent polydisperse Voronoi model in the context of the glass transition. The Voronoi model is useful as a phenomenological approximation to the behaviour of real epithelial cells. Molecular dynamics simulations are carried out with temperature as a varying parameter and the preferred target shape index as a control parameter. This allows one to study the static and dynamical statistical properties in the temperature regime where mode-coupling theory is dominant. Both the dynamic and hexatic correlation lengths are found to have a negative relation with temperature. In contrast, the fragility of the polydisperse Voronoi model is demonstrated to be strong and independent of the preferred target shape index. A strong fragility corresponds to non-increasing potential energy barriers present within Goldstein's energy landscape. Finally, other measures unique only to the Voronoi model are carried out. The area and perimeter auto-correlation functions confirm ergodicity. An unexpected behaviour in the area radial correlation function might justify further investigations.
author2 Pica Ciamarra Massimo
author_facet Pica Ciamarra Massimo
Loh, Leon Yeong Wei
format Final Year Project
author Loh, Leon Yeong Wei
author_sort Loh, Leon Yeong Wei
title Glass transition behaviour In a voronoi model of cell tissues
title_short Glass transition behaviour In a voronoi model of cell tissues
title_full Glass transition behaviour In a voronoi model of cell tissues
title_fullStr Glass transition behaviour In a voronoi model of cell tissues
title_full_unstemmed Glass transition behaviour In a voronoi model of cell tissues
title_sort glass transition behaviour in a voronoi model of cell tissues
publishDate 2018
url http://hdl.handle.net/10356/74107
_version_ 1759858096931340288